Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq107653 313 3e-80 >seq107653 Length=176415 Score = 313 bits (346), Expect = 3e-80 Identities = 723/1075 (67%), Gaps = 61/1075 (6%) Strand=Plus/Minus Query 118782 TTCGACCCCGTGCTGATCTCCCTGATCCGCCGTTCGATGCCTAAGCTGATTGCTTATGAC 118841 |||||||| | |||||| |||| || | || || ||||| || ||||| || || ||| Sbjct 133490 TTCGACCCGATCCTGATCAACCTGGTCAGGCGCTCCATGCCGAACCTGATGGCCTACGAC 133431 Query 118842 ATCGCTGGTGTTCAACCGATGACTGGTCCTACTGGACTGATCTTCGCCATGCGCTCCCGC 118901 ||| ||||| || || ||||| ||||| || || |||||||||||||| ||||| ||| Sbjct 133430 ATCATGGGTGTGCAGCCCATGACCGGTCCGACCGGCCTGATCTTCGCCATCCGCTCGCGC 133371 Query 118902 TATGGCACCAACCGCACCGCTGGCGCTGAGTCCTTCTTCAACGAAGCAGACACCGAGTTC 118961 || ||| | ||| | ||| ||| |||||| |||||| | |||||| | | Sbjct 133370 TACGGCTC-----GCAGA-CGGGCAACGAGGCCTTCTACAACGAGGTCAACACCGCCTAC 133317 Query 118962 TCTGCTGAGAACGCTG---CTAGCAACCTCGGTC----GCAC-------CGCTCA-GAGC 119006 ||| | | | | | | | | | |||||||| |||| ||||| | || Sbjct 133316 TCTTCGGTCACCTCGGGCGCGAACGTCCTCGGTCAGAAGCACGTTGGTACGCTCCCGGGC 133257 Query 119007 GGCAGCA----ACCCTGGTCTGCTGAATGACAGCGGCACCTACA-CT--GTCTCTGACGG 119059 ||||| | || | ||| ||| || ||||| || | ||| ||| Sbjct 133256 AACAGCACGGTAACC-GCCAACCTGGCTGAGGTTGGTCTCTACAACTACGGCTC---CGG 133201 Query 119060 TATGCCTACCGCTGAGTCGGAAGCTCTGGGTGACGCTG-CTGGTA-AC-GCTTTCGCTGA 119116 ||| | || ||| || | || ||||| || ||| || | | || |||| |||| Sbjct 133200 AATGTCCACGGCTCAGGCCGAGGCTCTCGGAA---CTGACTCGAACACTGCTTGGCCTGA 133144 Query 119117 GATGAACTTCTCGATCGAGAAGGTCACCGTGACTGCCAAGTCCCGTGCTCTGAAAGCTGA 119176 |||| |||| ||||||||||||||||| || || ||| ||| || ||| || || Sbjct 133143 GATGGCCTTCAGCATCGAGAAGGTCACCGTCACGGCGAAGAGCCGCGCGCTGGCCGCCGA 133084 Query 119177 GTACAGCCTCGAACTCGCCCAAGACCTGAAAGCAGTTCATGGTCTGGACGCTGAGAGCGA 119236 |||| | ||||| || || |||||||| ||||| || ||||| ||||| ||| || Sbjct 133083 GTACTCGATGGAACTGGCACAGGACCTGAAGGCAGTACACGGTCTCGACGCCGAGGCTGA 133024 Query 119237 ACTCGCCAACATCCTCTCCACTGAGGTTCTTGCCGAGATCAACCGTGAGGTGGTTCGTAC 119296 ||| | ||||||||| |||| ||| | || |||||||||||||| |||| ||||||||| Sbjct 133023 GCTCTCGAACATCCTCGCCACCGAGATCCTGGCCGAGATCAACCGCGAGGCGGTTCGTAC 132964 Query 119297 CGT-ATATCGTATCGCCCGCCCTGGTGCTCAGAACAACACTGCTACCGCTGGTATCTTCG 119355 || | | | |||| | || | |||| | |||| | | | | || |||||| Sbjct 132963 GGTCCTGACCT-CCGCCAAGCAGGGATCGCAGATCGACACGACCAACCCGGGCTTCTTCG 132905 Query 119356 ACCTGGACGTTGACTCCAATGGTCGTTGGTCGGTTGAGAAGTTCAAAGGTCTGCTCTTCC 119415 |||||||||| ||||| || || || |||||||||||||||||||| |||||| |||| Sbjct 132904 ACCTGGACGTCGACTCGAACGGCCGCTGGTCGGTTGAGAAGTTCAAGGGTCTGTATTTCC 132845 Query 119416 AAATTGAGCGTGACATGAACGCAATCGGTCATGAGACTCGTCGCGGGAAGGGTAACATCC 119475 | || ||||| || ||| |||| | ||||| | || || ||||||||||||| Sbjct 132844 ACATCGAGCGCGAGTGCAACCAGATCGCCAAGGAGACGAGGCGTGGCAAGGGTAACATCC 132785 Query 119476 TGATCTGCTCTGCTGACGTGGCATCTGCCCTGTCGATGGCTGGCGTTCTGGATTACACCC 119535 |||||||| | || ||||||||||| || ||| || ||| || | || | Sbjct 132784 TGATCTGCACGGCGGACGTGGCATCGGCTCTGAACGCCGCCGGCTACCT---CTCCATGC 132728 Query 119536 CTGCCCTGAGCGGCAACAGCGGTCTCCNNNNNNNNNNNNNNNNNNNNNCCCTTGCTGGTA 119595 | |||| | | |||| |||| || | || |||| Sbjct 132727 CGAACCTGGGTGACAAC------CTCCAGGTCGACGACACGGGCAACACCTTCGCGGGTA 132674 Query 119596 CTCTGAACGGTCGCATCAAGGTCTACGTTGATCCTTATTCCGCTAACGTAAGTGATCGTC 119655 |||||||||||||||||||||||| | || || || ||| | || | | Sbjct 132673 TCCTGAACGGTCGCATCAAGGTCTACATCGACCCCTA---CGCGATCG---GCGGAAACT 132620 Query 119656 ACTTCTACGTTGCTGGTTACAAGGGTAGCAGCGCC-TATGACGCTGGTCTGTTCTACTGC 119714 || | | ||| || ||||||||| | |||| || ||||| || | ||||||||| Sbjct 132619 ACATGTGCGT---AGGCTACAAGGGT-CCGACGCCTTACGACGCCGGCATCTTCTACTGC 132564 Query 119715 CCCTATGTGCCCCTGCAAATGGTTCGTGCCGTTGGTCAGGACACCTTCCAGCCCAAGATT 119774 || || || || || || ||||||||| || | | || | |||| || || Sbjct 132563 CCGTACGTTCCTCTCCAGCAGGTTCGTGCTGTGTGGCCGGGTAACTTCGGTCCTCGCATC 132504 Query 119775 GGCTTCAAGACCCGCTACGGCATGGTCGCCAATCCCTTCGCTGAGGGTACTGCCC 119829 ||||||||||||||||||||||||||||| || |||||||| |||| |||| || Sbjct 132503 GGCTTCAAGACCCGCTACGGCATGGTCGCGAACCCCTTCGCACAGGG-ACTGACC 132450 Score = 100 bits (110), Expect = 3e-16 Identities = 181/261 (69%), Gaps = 8/261 (3%) Strand=Plus/Minus Query 113744 ATCAACCCTGTTGTTGCATTCCCTGGCGAAGGTATCGTTCTCTATGGTGATAAGACTGCT 113803 ||||||||||| || | ||| || || | || ||||| || || ||||| ||| Sbjct 142041 ATCAACCCTGTCGTGTCCTTCGACGGTCTCGGAACGGTCCTCTACGGCGACAAGAC-GCT 141983 Query 113804 C-TCGCAACTTCCTCCGCATTCGACAGAATCAACGTTCGTCGCCTGTTCCTGGTTATCGA 113862 | |||| | |||| || |||||||| |||||||| || | || ||| | || |||| Sbjct 141982 CCTCGCGAAGCCCTCGGCCTTCGACAGGATCAACGTCCGCAGGCTCTTCATCGTCCTCGA 141923 Query 113863 GAAAGCAATCAGCCTCGCTGCTAAGTCCCAACTGTTTGAACTCAACGACGAGTTCACACG 113922 ||| || ||| || || |||| ||||||||| || |||||||||||||||| || Sbjct 141922 GAAGGCTATCTCGACGGCCGCGAAGTACCAACTGTTCGAGTTCAACGACGAGTTCACCCG 141863 Query 113923 ---TCAAGGATTCAAGAACGTCGTTGATCCTTATCTGAGAGGTGTTCAGTCCCGTCGCGG 113979 ||| |||| |||| | || | || || ||| ||| | ||||||| ||||| Sbjct 141862 GGCTCA---GTTCAGGAACATGGTCAACCCGTACCTGCGAGACATCAAGTCCCGCCGCGG 141806 Query 113980 TATCATTGACTACCTCGTGGT 114000 | | | |||| ||| || || Sbjct 141805 TCTGACCGACTTCCTGGTCGT 141785 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 591375236821520