Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Clavaria_20fumosa_20[genbank_20GCA_5F001179745.1_202015-07-08] 111,201 sequences; 70,469,476 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq106734 152 1e-31 seq110395 143 6e-29 seq109776 104 5e-17 seq11946 100 6e-16 seq64136 96.9 7e-15 seq6041 96.9 7e-15 seq110268 91.5 3e-13 >seq106734 Length=403 Score = 152 bits (168), Expect = 1e-31 Identities = 161/211 (76%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 282890 TACC-AGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCT 282948 |||| ||||| | ||| || || ||||| || ||||| | |||||||| || |||| Sbjct 241 TACCGAGATGAAGGGTGGACTCCTTCTGGATATTATAGTCCGAGAGCGTGCGCCCGTCCT 182 Query 282949 CTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTT 283008 | | || || ||||| ||||||| |||||||||||| || ||||| |||||||| | Sbjct 181 CCAACTGCTTGCCGGCGAAGATCAGACGTTGTTGGTCGGGGGGGATACCTTCCTTGTCCT 122 Query 283009 GGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCT 283068 | ||||| || || ||| | |||||||||||||||| || || || || ||||| |||| Sbjct 121 GAATCTTGGCCTTGACGTTGTCGATAGTGTCCGAAGACTCTACCTCCAGCGTGATTGTCT 62 Query 283069 TACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 | ||||| | ||||| || || |||||||| Sbjct 61 TGCCCGTGAGCGTCTTCACAAAGATCTGCAT 31 >seq110395 Length=10286 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || || || || || |||| ||| | ||| || || |||||||||||||| | Sbjct 9982 CCGCCGCGAAGACGGAGGACCAAATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 9923 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || || ||||| || || || ||||| ||||| | ||| ||||| || || Sbjct 9922 AGGGTACGCCCGTCCTCGAGCTGCTTGCCGGCGAAGATAAGACGCTGTTGATCGGGGGGG 9863 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || || ||||| || ||||| || || || ||| | ||||| || || || | |||||| Sbjct 9862 ATGCCTTCCTTATCCTGGATTTTGGCCTTAACGTTGTCGATGGTATCGGACGATTCGACC 9803 Query 283053 TCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| ||||||||||| || || | ||||||||||| |||||||| Sbjct 9802 TCGAGGGTGATCGTCTTCCCAGTAAGCGTCTTAACGAAGATCTGCAT 9756 Score = 140 bits (154), Expect = 7e-28 Identities = 159/212 (75%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 282889 GTACCA-GATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCC 282947 |||||| |||| | || ||| || ||||| ||||| || | ||||||||||| || Sbjct 10195 GTACCAAGATGGAGGGTCGATTCCTTCTGGATATTGTAATCGGAGAGCGTGCGGCCGTCT 10136 Query 282948 TCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCT 283007 || | || || || ||||| |||| || || ||||| ||| || || |||||||| Sbjct 10135 TCCAACTGCTTGCCTGCAAAAATCAGGCGCTGCTGGTCGGGCGGGATGCCTTCCTTGTCC 10076 Query 283008 TGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTC 283067 |||||||| || || ||| ||||||| ||||| || | ||||| ||||| ||||| ||| Sbjct 10075 TGGATCTTAGCCTTGACGTTATCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTC 10016 Query 283068 TTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || || | ||||| |||||||| ||||| Sbjct 10015 TTCCCAGTGAGCGTCTTGACGAATATTTGCAT 9984 Score = 93.3 bits (102), Expect = 9e-14 Identities = 83/104 (80%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 ||||||||||| |||||||| || || ||| | || || || || || | |||||| || Sbjct 9577 CCCTCCTTGTCCTGGATCTTAGCCTTGACGTTGTCAATGGTATCAGAGGATTCGACCTCC 9518 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||||||| ||||| || || | |||||| ||||| |||||||| Sbjct 9517 AGAGTGATGGTCTTTCCGGTGAGAGTCTTTACGAAGATCTGCAT 9474 >seq109776 Length=48066 Score = 104 bits (114), Expect = 5e-17 Identities = 126/171 (74%), Gaps = 2/171 (1%) Strand=Plus/Minus Query 230221 GTCTTATCGGCATGAATGCTGATCTCATGGGGCAATATATCGAATTCGTAGCTGATCGTA 230280 |||| ||||||||||| || | || ||| | || || || |||||||| ||||| || Sbjct 3744 GTCTCATCGGCATGAACGCCAAACTAATGTGCCAGTACATTGAATTCGTCGCTGACCGGT 3685 Query 230281 TTTTCGTGGCGCTAGGGTACGAGAAAGTGTATAACTCCAAGAACCCCTTCGCTTTTATGG 230340 | | | || || || | ||||| | || || || | |||||| |||| || |||| Sbjct 3684 TGCTAATTGCTCTCGGCAATGAGAAGATTTACAAGTCTACGAACCCATTCGACTTCATGG 3625 Query 230341 AGCTCATTTCACTCCAGGGGAAAACTAACTTCTTC--GAAAAGCGTGTCAG 230389 | | || ||||||||||| || |||||||||||| |||| ||||||||| Sbjct 3624 ATATGATCTCACTCCAGGGCAAGACTAACTTCTTCGAGAAACGCGTGTCAG 3574 >seq11946 Length=4023 Score = 100 bits (110), Expect = 6e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 43983 CCAAGCGTCGACATCGGAGTTGTACGGAAAGGTTCAGGAGATTCCTCAAACAGAAAGGAC 44042 ||| || || ||||| || ||||| ||| |||||| | | ||||| |||||| || Sbjct 2407 CCAGGCATCCACATCCGAATTGTATGGATTGGTTCAAGCTGTCCCTCAGTCAGAAACTAC 2466 Query 44043 TCCGTTTTATCCCCGGAGTCCATATGGTGTGGCGAAGCTATATGCCTATTGGATTTGTAA 44102 |||||||||||| ||| || || | || || || || |||||||||||||| Sbjct 2467 TCCGTTTTATCCGCGGTCGCCCTACGCAGTTGCAAAACTCTATGCCTATTGGATAACCGT 2526 Query 44103 AAATTATCGCGAGTCGTATGGGATGTTCGTTTGTAATTCGATTTGTTTCAATCACGAAAG 44162 |||||||||||| | ||||| ||||| | ||| || ||| || ||||| ||||| Sbjct 2527 AAATTATCGCGAAGCCTATGGCATGTTTGCTTGCAACGGGATACTATTTAATCATGAAAG 2586 Query 44163 TCC 44165 ||| Sbjct 2587 TCC 2589 >seq64136 Length=10024 Score = 96.9 bits (106), Expect = 7e-15 Identities = 93/117 (79%), Gaps = 2/117 (2%) Strand=Plus/Minus Query 301432 GACCCCTATATCAACGTCGATCCGGGGACGATG-AGCCCGACTCAACATGGAGAAGTGTT 301490 ||||||||| | ||||||||||| || |||||| |||| | ||| || || ||| || Sbjct 312 GACCCCTATCTGAACGTCGATCCCGGCACGATGTCGCCCTA-TCAGCACGGCGAATGCTT 254 Query 301491 CGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCAC 301547 |||||| ||||| ||||| |||||||| || |||||||| || ||||| || || || Sbjct 253 CGTGACCGATGACGGTGCGGAAACCGACCTCGATCTGGGTCATTACGAGCGCTTTAC 197 >seq6041 Length=1705 Score = 96.9 bits (106), Expect = 7e-15 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 301318 AAATTTATGTTCATCACCGGCGGCGTTTCAAGTTCATTGGGGAAAGGCCTCGCTGCTGCG 301377 |||||| | ||| |||| |||||||| ||| |||| ||||| | || || || Sbjct 1487 AAATTTGTCTTCGTCACTGGCGGCGTCGTGTCTTCCCTGGGTAAAGGGATTGCCGCCGCC 1546 Query 301378 AGTATCGCCAGTTTACTAGAGAGGCGATGC-TTAAAGATAGCGATGCTTAAAATGGACCC 301436 ||||| | || || ||| || |||||| | | ||||| || | || || Sbjct 1547 TCCCTCGCCGCGATCCTCGAATCGCGCGGCCTTAAAGTCACC-ATGCTCAAGCTCGATCC 1605 Query 301437 CTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGTGAC 301496 ||| ||||||||||||||||| || ||||| || | || || || ||||||||||| || Sbjct 1606 CTACATCAACGTCGATCCGGGCACCATGAGTCCCATGCAGCACGGCGAAGTGTTCGTCAC 1665 Query 301497 GGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTAC 301536 || || || || |||||||| || || || || |||||| Sbjct 1666 CGACGACGGGGCCGAAACCGACCTCGACCTCGGCCACTAC 1705 >seq110268 Length=37665 Score = 91.5 bits (100), Expect = 3e-13 Identities = 100/133 (75%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 273773 CAGTTTCGTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACC 273832 ||||| |||||| ||||||||||| ||||||||||| || || | | | || ||| Sbjct 12024 CAGTTGCGTGAAGATGTACCTGGCTGATGCATGGTCCTTACCGCCCTCGTGGCGCGTACC 12083 Query 273833 AAACTGACCCTCGGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCAT 273892 | ||||||| | ||||| || | || | ||||||||| || ||||| ||||| |||| Sbjct 12084 ATACTGACCATTGGGCATTAACAGATTCAGGTTGTTGCTTCCAACGTAGTCCTGCGCCAG 12143 Query 273893 ATTCACGATAGTC 273905 || ||||| ||| Sbjct 12144 GTTGACGATGGTC 12156 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1045247844913454