Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq345 100 6e-16
seq370 84.2 5e-11
>seq345
Length=266695
Score = 100 bits (110), Expect = 6e-16
Identities = 168/238 (71%), Gaps = 4/238 (2%)
Strand=Plus/Plus
Query 61089 CAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAAGGACT 61148
||||| || || || || || ||||| || || || | || || | || | |||
Sbjct 140967 CAAGCCTCCACCTCCGAGCTCTATGGCAAGGTCGTCGAGACGCCACAGAGCGAGACGACG 141026
Query 61149 CCGTTTTATCCTCG-TAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGGATTTGTAA 61207
||||| ||||| || | |||| || || ||||| || ||||| |||||||||||
Sbjct 141027 CCGTTCTATCCACGCTCGCCC-TACGGCTGCGCAAAGCTCTACGCCTACTGGATTTGCGT 141085
Query 61208 AAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGAT-TTGTTTCAATCACGAGA 61266
|||||| | ||| ||||| ||||||| |||||| ||| |||||| || |||||||
Sbjct 141086 GAATTACAGGGAGAGTTATGGGATGTTTGCATGTAATGGGATCTTGTTT-AACCACGAGA 141144
Query 61267 GTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAAATAT 61324
|||| | | || | ||||||||| | || ||||||| ||| ||||| ||||
Sbjct 141145 GTCCAAGGCGCGGACGGACGTTTGTGACGAGGAAGATTACGAGGGCTGTTGCTGATAT 141202
>seq370
Length=376741
Score = 84.2 bits (92), Expect = 5e-11
Identities = 123/174 (71%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 230446 CTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATT 230505
|| |||||||||||| | || | ||| | || || || || || || || ||||| |
Sbjct 251996 CTCATTGGCATGAACTCCGATTTGATGTGCCAATATATTGAGTTTGTTGCTGACCGACTG 252055
Query 230506 TTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAG 230565
| || | ||||| | |||||||| |||||| |||||| || | || |||||
Sbjct 252056 CTCGTCTCTCTTGGCAATGAGAAAGTCTACAACAAGTCGAACCCTTTCGACTTCATGGAT 252115
Query 230566 CTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTAT 230619
| ||||| | || || ||||| |||||||| |||||||| ||| ||| |||
Sbjct 252116 ATGATTTCATTGCAGGGCAAGACTAACTTCTTTGAAAAGCGAGTCTCTGATTAT 252169
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057815569803860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |