Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq370 284 1e-71 seq433 143 3e-29 seq298 138 1e-27 seq353 91.5 2e-13 seq367 87.8 2e-12 >seq370 Length=376741 Score = 284 bits (314), Expect = 1e-71 Identities = 409/572 (72%), Gaps = 11/572 (2%) Strand=Plus/Plus Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| || || || |||||||| | ||||||| ||||||| Sbjct 251271 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACCTC 251330 Query 116696 TCCAAGGACACGAGCGACTGGGAG---CGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 ||||||||| |||||| | ||| | |||||||||||||| || |||||| Sbjct 251331 TCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGACAACGAGCGTCACTTCATCTCA 251390 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 || || || ||||| ||||||||| || || |||||||||||||| || || ||||| Sbjct 251391 CATGTCCTCGCCTTCTTCGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTGGAGCGC 251450 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | | || || |||| || ||||| || || ||||| || || || ||| ||| Sbjct 251451 TTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCATGATG 251510 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT---GCGCTCTTCG 116929 |||||| | || || || | || || || |||||||| ||| | | | | | Sbjct 251511 GAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCCCGCC 251570 Query 116930 GAG-GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGC 116988 || | ||| | | | || ||||| | || || || || ||| |||| |||| || Sbjct 251571 CAGCGCGAA--TAC--CTCTTCGACGCCGTTGACACTATCCCTTGCATCAAGAAGAAAGC 251626 Query 116989 CGAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGC 117048 ||| ||||| || ||||||| ||| | |||| | |||| | ||| || || || || Sbjct 251627 CGACTGGGCTCTCACCTGGATCTCCGATAAAGAGTCTACCTTTGCCGAACGTCTAGTTGC 251686 Query 117049 CTTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAA 117108 |||||| || || |||||| | ||||| || ||| |||||| |||| || ||| | || Sbjct 251687 CTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGTTGAA 251746 Query 117109 GAAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGG 117168 ||| || || |||||||||||| |||| ||| |||||||||||| | | || || || Sbjct 251747 GAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTGATGAAGG 251806 Query 117169 TCTGCATTGCGACTTTGCCTGTTTGCTGTTCA 117200 ||||| ||| |||||||| | ||||||| Sbjct 251807 CATGCATACCGATTTTGCCTGCCTACTGTTCA 251838 Score = 141 bits (156), Expect = 1e-28 Identities = 363/550 (66%), Gaps = 2/550 (0%) Strand=Plus/Minus Query 116648 TACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTGTCCAAGGACACG 116707 ||||| ||||| |||| ||||||||||| ||||| || | ||| | || | || || Sbjct 250224 TACAAGAAGGCACAGGCTTCGTTCTGGACTGTCGAAGAAATTGACTTATCGCATGATACC 250165 Query 116708 AGCGACTGGGAGCGCTTGAACGACAACGAGCGCCATTTCATCAAGCACGTGCTGGCCTTT 116767 | |||||| | | ||| || || ||||| ||| | || ||| || || || Sbjct 250164 TGGGACTGGATGAACCTGACAGATCCGGAACGCCACTTCCTTTCGCGCGTTCTCGCGTTC 250105 Query 116768 TTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTTCGCTCAGGAGGTG 116827 || ||| | || ||||| ||||||||||| || || || || ||| | || ||| Sbjct 250104 TTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTGGAACGCTTCTCGAGTGAAGTG 250045 Query 116828 CAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGGAGAACGTGCACTCG 116887 ||| | || ||||| || || ||||| || ||||| || || || || |||||||| Sbjct 250044 CAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTGCACTCC 249985 Query 116888 GAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAGGAGAAGCTCCGTTTG 116947 || |||||| ||| || ||||| ||| | | | || || | | | | Sbjct 249984 GAGGCGTATTCCCTCCTAATTGACACTTACATCAAGGATCCTGACGAACGGGACTTTCTC 249925 Query 116948 TTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAGTGGGCGCTGCGCTGG 117007 || || ||||| || || || | |||| | ||||| || ||||| || ||| Sbjct 249924 TTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTGAAATGG 249865 Query 117008 ATCGCCGGCAGAGA-GGCCGCCTTCGGCGAGCGCCTGGTGGCCTTCGCGGCCGTCGAGGG 117066 || | | |||| |||| || ||||| || || || ||||| || || || || Sbjct 249864 AT-TTCTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGCAGTGGAAGG 249806 Query 117067 CGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGCCTCATGCC 117126 | | || ||||| || || || ||||| |||||| | | || || || | ||||| Sbjct 249805 CATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGGATTGATGCC 249746 Query 117127 CGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGCGACTTTGC 117186 || |||||||| ||||||||| ||| | |||||||| ||||| ||| ||||| Sbjct 249745 AGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATACCGATTTTGC 249686 Query 117187 CTGTTTGCTG 117196 || ||||| Sbjct 249685 TTGCCTGCTG 249676 >seq433 Length=1580550 Score = 143 bits (158), Expect = 3e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || ||||| |||||||| |||||||| | || || || | || Sbjct 1108526 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACGTTGGAGGTGGAGTCATCC 1108585 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||||| || |||| ||||| ||||||||||| | ||||| Sbjct 1108586 GACACCATTGATAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 1108645 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 ||||| || |||| ||| || || ||||| || || | |||||||||| ||||||||| Sbjct 1108646 CAACGTCTGATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGCACCCTCTCTGACTACAAC 1108705 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||| ||| | || || ||||| || | ||| | | ||||| Sbjct 1108706 ATCCAGAAAGAGTCTACACTCCATCTTGTTCTTCGCCTCCGTGGCGG 1108752 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||||||||| ||||| || |||| ||||| | || Sbjct 1108070 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTCC 1108129 Query 40750 GACAGCGT-GCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 || | | | | |||| |||| | || || | ||||| ||||||||||| | ||||| Sbjct 1108130 GATACCATCGATAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 1108188 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||||| || |||| ||| || || ||||| || || | ||||||||| |||||||| Sbjct 1108189 GCAACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGCACCCTGTCTGACTACAA 1108248 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||||||||||| | || || || || || | || || |||| || Sbjct 1108249 TATCCAGAAGGAGTCAACCCTTCACCTTGTTCTCCGTCTGCGGGGTGG 1108296 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 ||||| || ||||| || || ||||| ||||| |||||||| |||| |||||| | || Sbjct 1108754 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCC 1108813 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | |||| || |||| || || || || || ||| | || || Sbjct 1108814 GACACAATTGACAATGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCAA 1108873 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || || |||| ||| ||||||||||| || || | || || ||| || |||||| Sbjct 1108874 CAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCTGATTACAAC 1108933 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 || ||||||||| |||| || || || || Sbjct 1108934 ATTCAGAAGGAGTCCACCCTCCACCTTGT 1108962 Score = 82.4 bits (90), Expect = 8e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 40804 GACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 40863 ||||| ||||| || |||| ||| ||||| ||||| || |||| |||||| ||| || Sbjct 1107956 GACCAACAACGTCTTATCTTCGCTGGCAAGCAGCTTGAGGACGGGCGCACTCTCTCGGAT 1108015 Query 40864 TACAACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||| ||||||||||| |||| || ||||| || Sbjct 1108016 TACAATATCCAGAAGGAATCCACTCTACATCTCGT 1108050 >seq298 Length=714934 Score = 138 bits (152), Expect = 1e-27 Identities = 158/210 (75%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || || || || || ||||| || |||||| |||| ||||| | | Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 40750 GACAGCGTGCA-AACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | |||| | |||| || |||| ||||| || ||||| ||| | || || Sbjct 385463 GACACCATTGACAACGTT-AAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCA 385521 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || ||||||| ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 385522 ACAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 385581 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||| ||||||||| | || || ||||| || Sbjct 385582 CATTCAGAAGGAGTCTACTCTCCATCTCGT 385611 >seq353 Length=244416 Score = 91.5 bits (100), Expect = 2e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 || ||| | ||||| |||||| | |||| ||| ||||| ||||| || || | |||||| Sbjct 157079 ATTCCCCCTGACCAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCACC 157138 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| |||||||||||||||||||||| | || || || Sbjct 157139 CTCAGCGACTACAACATCCAGAAGGAGTCTACCCTCCA 157176 >seq367 Length=894951 Score = 87.8 bits (96), Expect = 2e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 40795 ATCCCCGCGGACCAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACC 40854 ||||| | |||||||| ||| | |||| ||| ||||| ||||| || || | |||||| Sbjct 540701 ATCCCTCCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCACC 540760 Query 40855 CTCAACGACTACAACATCCAGAAGGAGGCCACGCTGCA 40892 |||| ||||||||||||||| |||||| | || || || Sbjct 540761 CTCAGCGACTACAACATCCAAAAGGAGTCTACCCTTCA 540798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215194170720