Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_001993.1 Length=236120 Score E Sequences producing significant alignments: (Bits) Value seq433 98.7 2e-15 >seq433 Length=1580550 Score = 98.7 bits (108), Expect = 2e-15 Identities = 163/234 (70%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 124539 ATGCAAATATTTATAAAGACACTAACAGGCAAAACTATAACTATAGAGATTGAAGCAAAT 124598 ||||| || || | ||||| || || ||||| || || ||| | ||| | ||| | Sbjct 1108754 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCC 1108813 Query 124599 GATACAATTTCTAATTTAAAACAGAAAATTCAAGATAAAGAAGGTATACCACCTGATCAA 124658 || |||||| ||| | || || ||||||||||| |||||||| || ||||||||| Sbjct 1108814 GACACAATTGACAATGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCAA 1108873 Query 124659 CAAAGGCTTATTTTTGCAGGAAAACAATTAGAGGATAGTCGAACATTAGAAGATTATAAT 124718 || | ||||| || || || ||||| | || ||| |||| || | ||||| || Sbjct 1108874 CAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCTGATTACAAC 1108933 Query 124719 ATTCAAAAAGAATCAACTTTGCATTTGGTTTTACGTTTACGAGGTGGT-ATTAA 124771 ||||| || || || || | || | ||| | ||| | || |||||| ||||| Sbjct 1108934 ATTCAGAAGGAGTCCACCCTCCACCTTGTTCTTCGTCTCCGTGGTGGTAATTAA 1108987 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755450126329600