Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq298 141 8e-29 seq433 123 2e-23 >seq298 Length=714934 Score = 141 bits (156), Expect = 8e-29 Identities = 153/203 (75%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595 |||| |||||||| || ||||||||||| ||| | ||||| ||||||||||| Sbjct 385605 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGC 385546 Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655 || |||||| ||||||||||||| |||||||| || ||||| |||||||| ||| || Sbjct 385545 TTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTC 385486 Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715 ||||| | || | |||||| | ||||||||||| ||| | || ||||| || Sbjct 385485 GCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTA 385426 Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738 ||||| || ||||| || ||||| Sbjct 385425 AGAGTCTTCACAAAGATTTGCAT 385403 Score = 109 bits (120), Expect = 5e-19 Identities = 164/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569 |||||||||| | | | || | |||| |||||||| || |||||||| || || Sbjct 385403 TACCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAG 385344 Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629 || ||||| || |||||||| || ||||| |||| ||||| ||||||||||||| Sbjct 385343 ACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAG 385284 Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689 | ||||| ||||| ||| || || || || | || | ||||| | || | Sbjct 385283 GGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCA 385224 Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742 |||| | ||| | ||| || ||||| || || || ||||| ||||||||| || Sbjct 385223 CCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCATGCCT 385171 Score = 109 bits (120), Expect = 5e-19 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 ||||||||| || ||| || |||||||||||||| | ||||||| ||| |||| Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 | || || ||||| |||| || ||||| || ||||| || || ||||||||||| || Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || ||| || | || | |||||| | |||||| || | ||| | || |||| Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738 |||| || || || || || || ||||| Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631 >seq433 Length=1580550 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || ||||| || || || ||||| || || |||||| |||||||||||| |||||| Sbjct 1108266 GTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCCTCGAGCTGCTTTCCA 1108207 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 ||| |||| ||||| ||||| |||||||| |||||||||||||| || || ||| Sbjct 1108206 GCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTG 1108147 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| ||| || | |||||| |||| || | || ||||| || || || Sbjct 1108146 ACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTC 1108087 Query 118722 TTTACAAAAATCTGCATG 118739 || || || ||||||||| Sbjct 1108086 TTGACGAAGATCTGCATG 1108069 Score = 122 bits (134), Expect = 8e-23 Identities = 153/209 (73%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590 |||| |||| |||||||||||| || |||||||| || | |||||| |||||| | Sbjct 1108733 CAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTA 1108674 Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650 |||| ||||||||| |||| ||||| || || || ||||| |||||||||||||| || Sbjct 1108673 GCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAA 1108614 Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710 | || || || | || | |||||| | ||| ||||| | || | || |||| Sbjct 1108613 TCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGC 1108554 Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCATG 118739 | || || || || || || ||||||||| Sbjct 1108553 CCGTAAGCGTCTTGACGAAGATCTGCATG 1108525 Score = 93.3 bits (102), Expect = 4e-14 Identities = 143/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594 ||||| || ||||| || |||||||||||||| | || || ||| || ||||| Sbjct 1108957 GTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTG 1108898 Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654 ||| || ||| |||| |||||||| ||||| || || || || ||||| ||| ||| || Sbjct 1108897 TTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTT 1108838 Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714 || || | || | ||||| | |||||||||| || | || ||||| || Sbjct 1108837 AGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGT 1108778 Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738 || || || || || |||||||| Sbjct 1108777 GAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601 || || || || |||||||| |||||| | || || ||||||||| || || || Sbjct 1108494 GTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCG 1108435 Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661 || | |||||||| || || || ||||| ||||| |||||||| || || || Sbjct 1108434 GCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1108375 Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721 || | |||| |||||| | ||||||||||| || | || ||||| || || || Sbjct 1108374 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTC 1108315 Query 118722 TTTACAAAAATCTGCAT 118738 || || || || ||||| Sbjct 1108314 TTGACGAAGATTTGCAT 1108298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433827111294424