Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_002169.1
Length=135611
Score E
Sequences producing significant alignments: (Bits) Value
seq298 141 8e-29
seq433 123 2e-23
>seq298
Length=714934
Score = 141 bits (156), Expect = 8e-29
Identities = 153/203 (75%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 118536 TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGT 118595
|||| |||||||| || ||||||||||| ||| | ||||| |||||||||||
Sbjct 385605 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGC 385546
Query 118596 TTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTT 118655
|| |||||| ||||||||||||| |||||||| || ||||| |||||||| ||| ||
Sbjct 385545 TTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTC 385486
Query 118656 TGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTC 118715
||||| | || | |||||| | ||||||||||| ||| | || ||||| ||
Sbjct 385485 GCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTA 385426
Query 118716 AGAGTTTTTACAAAAATCTGCAT 118738
||||| || ||||| || |||||
Sbjct 385425 AGAGTCTTCACAAAGATTTGCAT 385403
Score = 109 bits (120), Expect = 5e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Minus
Query 118510 TACCTCCGCGTAATCTCAACACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGC 118569
|||||||||| | | | || | |||| |||||||| || |||||||| || ||
Sbjct 385403 TACCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAG 385344
Query 118570 TCATAGTGCGCGTATCCTCGAGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAG 118629
|| ||||| || |||||||| || ||||| |||| ||||| |||||||||||||
Sbjct 385343 ACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAG 385284
Query 118630 GTATGCCCTCCTTGTCTGTAATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGA 118689
| ||||| ||||| ||| || || || || | || | ||||| | || |
Sbjct 385283 GGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCA 385224
Query 118690 CCTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 118742
|||| | ||| | ||| || ||||| || || || ||||| ||||||||| ||
Sbjct 385223 CCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCATGCCT 385171
Score = 109 bits (120), Expect = 5e-19
Identities = 149/208 (72%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 118531 CCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
||||||||| || ||| || |||||||||||||| | ||||||| ||| ||||
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
| || || ||||| |||| || ||||| || ||||| || || ||||||||||| ||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || ||| || | || | |||||| | |||||| || | ||| | || ||||
Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCAT 118738
|||| || || || || || || |||||
Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631
>seq433
Length=1580550
Score = 123 bits (136), Expect = 2e-23
Identities = 146/198 (74%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| ||||| || || || ||||| || || |||||| |||||||||||| ||||||
Sbjct 1108266 GTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCCTCGAGCTGCTTTCCA 1108207
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
||| |||| ||||| ||||| |||||||| |||||||||||||| || || |||
Sbjct 1108206 GCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCTTTG 1108147
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| ||| || | |||||| |||| || | || ||||| || || ||
Sbjct 1108146 ACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTC 1108087
Query 118722 TTTACAAAAATCTGCATG 118739
|| || || |||||||||
Sbjct 1108086 TTGACGAAGATCTGCATG 1108069
Score = 122 bits (134), Expect = 8e-23
Identities = 153/209 (73%), Gaps = 1/209 (0%)
Strand=Plus/Minus
Query 118532 CAAG-TGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGA 118590
|||| |||| |||||||||||| || |||||||| || | |||||| |||||| |
Sbjct 1108733 CAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTA 1108674
Query 118591 GCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAA 118650
|||| ||||||||| |||| ||||| || || || ||||| |||||||||||||| ||
Sbjct 1108673 GCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAA 1108614
Query 118651 TTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGC 118710
| || || || | || | |||||| | ||| ||||| | || | || ||||
Sbjct 1108613 TCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGC 1108554
Query 118711 CGGTCAGAGTTTTTACAAAAATCTGCATG 118739
| || || || || || || |||||||||
Sbjct 1108553 CCGTAAGCGTCTTGACGAAGATCTGCATG 1108525
Score = 93.3 bits (102), Expect = 4e-14
Identities = 143/204 (70%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 118535 GTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTG 118594
||||| || ||||| || |||||||||||||| | || || ||| || |||||
Sbjct 1108957 GTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTG 1108898
Query 118595 TTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTT 118654
||| || ||| |||| |||||||| ||||| || || || || ||||| ||| ||| ||
Sbjct 1108897 TTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTT 1108838
Query 118655 TTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGT 118714
|| || | || | ||||| | |||||||||| || | || ||||| ||
Sbjct 1108837 AGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGT 1108778
Query 118715 CAGAGTTTTTACAAAAATCTGCAT 118738
|| || || || || ||||||||
Sbjct 1108777 GAGGGTCTTGACGAAGATCTGCAT 1108754
Score = 86.0 bits (94), Expect = 5e-12
Identities = 137/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 118542 GTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCGAGCTGTTTTCCA 118601
|| || || || |||||||| |||||| | || || ||||||||| || || ||
Sbjct 1108494 GTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCG 1108435
Query 118602 GCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTAATTTTTTGTTTA 118661
|| | |||||||| || || || ||||| ||||| |||||||| || || ||
Sbjct 1108434 GCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTC 1108375
Query 118662 ACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTGCCGGTCAGAGTT 118721
|| | |||| |||||| | ||||||||||| || | || ||||| || || ||
Sbjct 1108374 ACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTC 1108315
Query 118722 TTTACAAAAATCTGCAT 118738
|| || || || |||||
Sbjct 1108314 TTGACGAAGATTTGCAT 1108298
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433827111294424
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |