Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_002331.1
Length=178733
Score E
Sequences producing significant alignments: (Bits) Value
seq298 122 1e-22
seq433 116 4e-21
>seq298
Length=714934
Score = 122 bits (134), Expect = 1e-22
Identities = 154/209 (74%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 42976 CCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTA 43035
|||| || | ||||||||||| ||||| |||||||||| ||||| ||| | || || |
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 43036 GCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGA 43095
| ||||| ||||| || || || ||||| ||||||| || | | |||||||||| |||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCC-TGA 385720
Query 43096 TTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTG 43154
| || | ||||| | | | ||||| || || || || | |||||||| |||
Sbjct 385719 ATCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTG 385660
Query 43155 CCCGTTAGCGTCTTTACAAAGATTTGCAT 43183
|| || || ||||| || |||||||||||
Sbjct 385659 CCGGTAAGGGTCTTCACGAAGATTTGCAT 385631
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
|||||| ||||| ||||| || | || || || |||| || |||||||| ||||||||
Sbjct 385594 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 385535
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111
||||| ||||| || |||| || | || ||||||||| ||| | || | | | |||
Sbjct 385534 GATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC-TGAATCTTCGCCTTAACGT 385476
Query 43112 CGCCACCG-TGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| || | |||| ||| || || |||| ||||| || ||||| || || ||||| |
Sbjct 385475 TGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCA 385416
Query 43171 CAAAGATTTGCAT 43183
|||||||||||||
Sbjct 385415 CAAAGATTTGCAT 385403
>seq433
Length=1580550
Score = 116 bits (128), Expect = 4e-21
Identities = 143/193 (74%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051
||| || || || ||||| |||| || || ||| | || ||||||||||| ||||||||
Sbjct 1108717 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAA 1108658
Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110
|| || || || ||||| | || | || |||||||||| ||| | || | ||||
Sbjct 1108657 GATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACAT 1108599
Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170
| | | |||||| || ||||| || | ||||||||| |||||||| |||||||| |
Sbjct 1108598 TATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGA 1108539
Query 43171 CAAAGATTTGCAT 43183
| ||||| |||||
Sbjct 1108538 CGAAGATCTGCAT 1108526
Score = 86.0 bits (94), Expect = 7e-12
Identities = 134/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 42993 TCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAAT 43052
||||| ||||| || ||||| | || || || | || || || ||||| || || ||
Sbjct 1108488 TCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAA 1108429
Query 43053 ATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTC 43112
||||| || || ||||| | || | || ||||||||| ||| || || | |
Sbjct 1108428 ATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTG 1108369
Query 43113 GCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACA 43172
| | |||||| || || || |||| |||||||| ||||| || || ||||| ||
Sbjct 1108368 TCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACG 1108309
Query 43173 AAGATTTGCATT 43184
||||||||||||
Sbjct 1108308 AAGATTTGCATT 1108297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 571813154118160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |