Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq298 113 3e-20
seq433 96.9 2e-15
>seq298
Length=714934
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237
|| || || || | |||| || ||||| |||||||||||||| || || ||||
Sbjct 385614 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 385555
Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297
|| | ||||||||| ||||| ||||| ||||| || ||| ||| | || ||||||||
Sbjct 385554 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC 385495
Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357
||||| ||| | | | | || | || | ||| ||||| || | ||||| ||
Sbjct 385494 TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTC 385435
Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
||||| || ||||| ||||||||||| |||||
Sbjct 385434 TTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403
Score = 86.0 bits (94), Expect = 4e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
|| ||||| || | || || || || | |||| || ||||| ||||| ||||| |||
Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || |||| || | ||||||||| || || || || || ||||| ||| ||
Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||| || ||||| ||| | | | || | || | ||||| ||
Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|| | ||||| || || |||||||| || || ||||||||||||||
Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175
>seq433
Length=1580550
Score = 96.9 bits (106), Expect = 2e-15
Identities = 163/232 (70%), Gaps = 8/232 (3%)
Strand=Plus/Minus
Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221
||| || ||||| | || || ||||| | || || ||||| || |||||||| ||
Sbjct 1108297 TCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGA 1108238
Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281
||| || | || || | |||||| || ||||| || || || ||||||||| ||
Sbjct 1108237 CAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGG 1108178
Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGA----ATCGGTCGATT 34337
| || ||||||||| ||||| ||||| || | |||||| ||||| || |
Sbjct 1108177 GATGCCCTCCTTGTCCTGGATCTTG-GCTTT-GAC--GTTATCGATGGTATCGGAAGACT 1108122
Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| || | || ||||| ||||| ||||| || || || |||||||||||
Sbjct 1108121 CGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222
||||| || || | || || || || | ||| |||||||| ||||||||||| ||
Sbjct 1108752 CCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAG 1108693
Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282
|| || | || || | |||||| || ||||| || || || || ||||| ||
Sbjct 1108692 AGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGG 1108633
Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342
| || ||||||||| ||||| ||| | || | || | |||| || || ||
Sbjct 1108632 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACC 1108573
Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389
|||| ||||||||| ||||| || || || || || |||||||||||
Sbjct 1108572 TCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526
Score = 93.3 bits (102), Expect = 3e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| |||||||| || || ||| ||| | || || | ||| ||||| |||||
Sbjct 1108944 TCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAG 1108885
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| || ||||| || || ||| | | ||||| || ||||| ||| | || |
Sbjct 1108884 ATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTG 1108825
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | |||| |||||||| || | |||||||| ||||| ||||| || || ||
Sbjct 1108824 TCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACG 1108765
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 1108764 AAGATCTGCAT 1108754
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323069550912320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |