Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq298 113 3e-20 seq433 96.9 2e-15 >seq298 Length=714934 Score = 113 bits (124), Expect = 3e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || || || || | |||| || ||||| |||||||||||||| || || |||| Sbjct 385614 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 385555 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||||||||| ||||| ||||| ||||| || ||| ||| | || |||||||| Sbjct 385554 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC 385495 Query 34298 GCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTT 34357 ||||| ||| | | | | || | || | ||| ||||| || | ||||| || Sbjct 385494 TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTC 385435 Query 34358 TTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| || ||||| ||||||||||| ||||| Sbjct 385434 TTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 Score = 86.0 bits (94), Expect = 4e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || || || || | |||| || ||||| ||||| ||||| ||| Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || |||| || | ||||||||| || || || || || ||||| ||| || Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||| || ||||| ||| | | | || | || | ||||| || Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || || |||||||| || || |||||||||||||| Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 >seq433 Length=1580550 Score = 96.9 bits (106), Expect = 2e-15 Identities = 163/232 (70%), Gaps = 8/232 (3%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || ||||| | || || ||||| | || || ||||| || |||||||| || Sbjct 1108297 TCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGA 1108238 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 ||| || | || || | |||||| || ||||| || || || ||||||||| || Sbjct 1108237 CAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGG 1108178 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGA----ATCGGTCGATT 34337 | || ||||||||| ||||| ||||| || | |||||| ||||| || | Sbjct 1108177 GATGCCCTCCTTGTCCTGGATCTTG-GCTTT-GAC--GTTATCGATGGTATCGGAAGACT 1108122 Query 34338 CGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| || | || ||||| ||||| ||||| || || || ||||||||||| Sbjct 1108121 CGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 95.1 bits (104), Expect = 8e-15 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 ||||| || || | || || || || | ||| |||||||| ||||||||||| || Sbjct 1108752 CCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAG 1108693 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGC 34282 || || | || || | |||||| || ||||| || || || || ||||| || Sbjct 1108692 AGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGG 1108633 Query 34283 ACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGACG 34342 | || ||||||||| ||||| ||| | || | || | |||| || || || Sbjct 1108632 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACC 1108573 Query 34343 TCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 |||| ||||||||| ||||| || || || || || ||||||||||| Sbjct 1108572 TCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Score = 93.3 bits (102), Expect = 3e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| |||||||| || || ||| ||| | || || | ||| ||||| ||||| Sbjct 1108944 TCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAG 1108885 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || ||||| || || ||| | | ||||| || ||||| ||| | || | Sbjct 1108884 ATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTG 1108825 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | || | |||| |||||||| || | |||||||| ||||| ||||| || || || Sbjct 1108824 TCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACG 1108765 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 1108764 AAGATCTGCAT 1108754 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323069550912320