Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_002816.1
Length=123500
Score E
Sequences producing significant alignments: (Bits) Value
seq298 122 7e-23
seq433 100 2e-16
>seq298
Length=714934
Score = 122 bits (134), Expect = 7e-23
Identities = 142/192 (74%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
|||||||||||||||||||||| || |||| |||| || || || || || |||||
Sbjct 385594 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 385535
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|| | |||||||| ||||| || | || ||||||||| ||| || ||||||
Sbjct 385534 GATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTT 385475
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| ||| ||||| | ||| || |||||||| || |||||||||||
Sbjct 385474 GTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCAC 385415
Query 45325 AAAGATTTGCAT 45336
||||||||||||
Sbjct 385414 AAAGATTTGCAT 385403
Score = 118 bits (130), Expect = 8e-22
Identities = 151/208 (73%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 45129 CCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188
||||||| || ||||||||||||||||||||||| || || ||| | || || |
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248
|||| || || || || || | |||||||||||||| || | ||||||||||||| ||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719
Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308
| || || || | | | |||| ||| || |||| ||| || |||||||
Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659
Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336
| || || |||||||| |||||||||||
Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631
>seq433
Length=1580550
Score = 100 bits (110), Expect = 2e-16
Identities = 138/193 (72%), Gaps = 0/193 (0%)
Strand=Plus/Minus
Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204
||| ||||| ||||||||||| || ||| | || || || || ||||| |||||
Sbjct 1108717 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAA 1108658
Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264
|||| || |||||||| ||||| | |||||||||||| ||| || ||| ||
Sbjct 1108657 GATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 1108598
Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324
| | | |||| ||||||||||| || || ||||||||||| || ||||| ||
Sbjct 1108597 ATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGAC 1108538
Query 45325 AAAGATTTGCATG 45337
||||| ||||||
Sbjct 1108537 GAAGATCTGCATG 1108525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 395072205083062
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |