Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq298 122 7e-23 seq433 100 2e-16 >seq298 Length=714934 Score = 122 bits (134), Expect = 7e-23 Identities = 142/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 |||||||||||||||||||||| || |||| |||| || || || || || ||||| Sbjct 385594 CTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAA 385535 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 || | |||||||| ||||| || | || ||||||||| ||| || |||||| Sbjct 385534 GATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTT 385475 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| ||| ||||| | ||| || |||||||| || ||||||||||| Sbjct 385474 GTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCAC 385415 Query 45325 AAAGATTTGCAT 45336 |||||||||||| Sbjct 385414 AAAGATTTGCAT 385403 Score = 118 bits (130), Expect = 8e-22 Identities = 151/208 (73%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 45129 CCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCA 45188 ||||||| || ||||||||||||||||||||||| || || ||| | || || | Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 45189 GTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAA 45248 |||| || || || || || | |||||||||||||| || | ||||||||||||| || Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 45249 TTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGC 45308 | || || || | | | |||| ||| || |||| ||| || ||||||| Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659 Query 45309 CCGTCAGAGTCTTCACAAAGATTTGCAT 45336 | || || |||||||| ||||||||||| Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631 >seq433 Length=1580550 Score = 100 bits (110), Expect = 2e-16 Identities = 138/193 (72%), Gaps = 0/193 (0%) Strand=Plus/Minus Query 45145 CTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCCAGTTGTTTTCCGGCGAA 45204 ||| ||||| ||||||||||| || ||| | || || || || ||||| ||||| Sbjct 1108717 CTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAA 1108658 Query 45205 TATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCAATTTTTTGCTTAACCGC 45264 |||| || |||||||| ||||| | |||||||||||| ||| || ||| || Sbjct 1108657 GATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATT 1108598 Query 45265 CGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTGCCCGTCAGAGTCTTCAC 45324 | | | |||| ||||||||||| || || ||||||||||| || ||||| || Sbjct 1108597 ATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGAC 1108538 Query 45325 AAAGATTTGCATG 45337 ||||| |||||| Sbjct 1108537 GAAGATCTGCATG 1108525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395072205083062