Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq370 179 3e-40
seq415 116 3e-21
seq298 116 3e-21
seq433 109 5e-19
>seq370
Length=376741
Score = 179 bits (198), Expect = 3e-40
Identities = 369/547 (67%), Gaps = 4/547 (1%)
Strand=Plus/Minus
Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641
||||| |||||| | || ||||| ||||| ||||||||| | ||| | || | |||
Sbjct 250224 TACAAGAAGGCACAGGCTTCGTTCTGGACTGTCGAAGAAATTGACTTATCGCATGATACC 250165
Query 57642 AGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTT 57701
| || ||| ||| | ||| | || | | || || | ||| | |||||
Sbjct 250164 TGGGACTGGATGAACCTGACAGATCCGGAACGCCACTTCCTTTCGCGCGTTCTCGCGTTC 250105
Query 57702 TTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTG 57761
|| ||| | || ||||| ||||| |||||||| | || ||| | || || ||||||
Sbjct 250104 TTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTGGAACGCTTCTCGAGTGAAGTG 250045
Query 57762 CAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCA 57821
|| | ||||||| | || || || || |||||| | || ||||| ||||| ||
Sbjct 250044 CAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTGCACTCC 249985
Query 57822 GAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA--GAAACGTAGAC 57879
|| |||||| || || || || || ||| | ||||| ||||| | || | |
Sbjct 249984 GAGGCGTATTCCCTCCTAATTGACACTTACATCAAGGATCCTGACGAACGGGACTTT--C 249927
Query 57880 TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAAT 57939
| ||| ||||||||||| || || | ||| | |||||||| ||| || | ||||
Sbjct 249926 TCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTGAAAT 249867
Query 57940 GGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAG 57999
|||| | || || || | || | ||| |||| | || ||||| || || ||||
Sbjct 249866 GGATTTCTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGCAGTGGAAG 249807
Query 58000 GTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGC 58059
| || || ||||| || |||||| || || |||||||||| || || || ||||||
Sbjct 249806 GCATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGGATTGATGC 249747
Query 58060 CCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTG 58119
| || |||| || ||||||| | || ||||||||||| | ||||| |||||||
Sbjct 249746 CAGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATACCGATTTTG 249687
Query 58120 CGTGCCT 58126
| |||||
Sbjct 249686 CTTGCCT 249680
>seq415
Length=258813
Score = 116 bits (128), Expect = 3e-21
Identities = 247/368 (67%), Gaps = 3/368 (1%)
Strand=Plus/Plus
Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564
||| | || || || |||| ||| || || ||||| |||||| || || |||||
Sbjct 185088 GTGTATGGCTCAAAGCATTCGTTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTAGGCATA 185147
Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGAC 22624
|| || | || ||||||||||||||||| ||| | ||| | ||||||| | |
Sbjct 185148 GGTGCTAGGAGGAGCGAGTTTCTCAAGCCAGTCTTAGCAATCTGTGCCTTGAGCGAAGGC 185207
Query 22625 CAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGA 22684
|||||||||| || | || || || |||| | |||||||| | ||| |
Sbjct 185208 CAGTCCCACAAGTCAGTGGGAGTAAC---CCCCCAAAGGTCGTATTGGAGTTGGCCTTGT 185264
Query 22685 CTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTC 22744
|| || |||||||| | || ||||| ||||||| || || |||||| ||||
Sbjct 185265 GAAGCAGGACTGCCTTCCCAAGTCTCGTAGGGACCATCACGAGCAGCGAGTTCGGAGCTG 185324
Query 22745 GCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCG 22804
||||| | |||| ||| || || ||||||||||| | |||| | ||| || ||
Sbjct 185325 GCCTCGAGCGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTAAGTTCTTTCGCAGCC 185384
Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864
| ||| | |||||||| | || ||| || || || | |||||||||||| | |
Sbjct 185385 TGGGAATCGAAAGGCATACGAAGAGCCATGAAAGCATCGGCGAGACCCTGAACGCCAAGA 185444
Query 22865 CCGATCGG 22872
|| || ||
Sbjct 185445 CCAATAGG 185452
>seq298
Length=714934
Score = 116 bits (128), Expect = 3e-21
Identities = 153/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| || || |||||||| || ||||| || |||||| |||| || || ||||
Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| | || | || || || || ||||||||||||| | || ||||| ||
Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCAA 385522
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|||||||| || ||||||||||| ||| | || ||| | || | ||| || |||
Sbjct 385523 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 385582
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
||||| || || || ||||| ||||| || ||
Sbjct 385583 ATTCAGAAGGAGTCTACTCTCCATCTCGTCCT 385614
Score = 105 bits (116), Expect = 6e-18
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || || || ||||| || || || || ||||||||| | || || ||| | ||
Sbjct 385174 CATGCAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTC 385233
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
|||| | | || | || || || || || ||||||||| | || ||||| ||
Sbjct 385234 TGACACTATTGATAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCA 385293
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371
||| ||||| || || |||||||| ||| | |||||| | || || || |||||
Sbjct 385294 GCAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAA 385353
Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404
|||||| || || || ||||| ||||| || ||
Sbjct 385354 CATTCAGAAGGAGTCTACTCTCCATCTCGTCCT 385386
>seq433
Length=1580550
Score = 109 bits (120), Expect = 5e-19
Identities = 152/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252
|||||||| ||||| ||||| || || ||||| || ||||| |||| || || | |||
Sbjct 1108298 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCC 1108357
Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312
|||| |||| | || || | || ||||||||||||| | || || |||||
Sbjct 1108358 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAA 1108417
Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372
|| ||||| || || || ||||| || | || || | || | ||||||||||
Sbjct 1108418 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAAC 1108477
Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405
||||| || |||||||| |||||||| || |||
Sbjct 1108478 ATTCAGAAGGAATCGACCCTTCATCTCGTTCTT 1108510
Score = 87.8 bits (96), Expect = 2e-12
Identities = 113/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251
|||||| || ||||| ||||| || || ||||| || || || |||| || || | ||
Sbjct 1108069 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTC 1108128
Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311
||| | |||| | |||||| | || ||||||||| ||| | || ||||||||
Sbjct 1108129 CGATACCATCGATAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 1108188
Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347
||| ||||| || |||||||| || ||| | || ||
Sbjct 1108189 GCAACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGA 1108224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445762934166240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |