Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq370 179 3e-40 seq415 116 3e-21 seq298 116 3e-21 seq433 109 5e-19 >seq370 Length=376741 Score = 179 bits (198), Expect = 3e-40 Identities = 369/547 (67%), Gaps = 4/547 (1%) Strand=Plus/Minus Query 57582 TACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTG 57641 ||||| |||||| | || ||||| ||||| ||||||||| | ||| | || | ||| Sbjct 250224 TACAAGAAGGCACAGGCTTCGTTCTGGACTGTCGAAGAAATTGACTTATCGCATGATACC 250165 Query 57642 AGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTT 57701 | || ||| ||| | ||| | || | | || || | ||| | ||||| Sbjct 250164 TGGGACTGGATGAACCTGACAGATCCGGAACGCCACTTCCTTTCGCGCGTTCTCGCGTTC 250105 Query 57702 TTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTG 57761 || ||| | || ||||| ||||| |||||||| | || ||| | || || |||||| Sbjct 250104 TTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTGGAACGCTTCTCGAGTGAAGTG 250045 Query 57762 CAAGTGACGGAGGCGAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCA 57821 || | ||||||| | || || || || |||||| | || ||||| ||||| || Sbjct 250044 CAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTGCACTCC 249985 Query 57822 GAAATGTATTCGCTACTCATCGATACGTACGTGAAGGACAACGACGA--GAAACGTAGAC 57879 || |||||| || || || || || ||| | ||||| ||||| | || | | Sbjct 249984 GAGGCGTATTCCCTCCTAATTGACACTTACATCAAGGATCCTGACGAACGGGACTTT--C 249927 Query 57880 TGTTCAACGCGATCGAAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAAT 57939 | ||| ||||||||||| || || | ||| | |||||||| ||| || | |||| Sbjct 249926 TCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTGAAAT 249867 Query 57940 GGATAAAAAGCGCCACGGCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAG 57999 |||| | || || || | || | ||| |||| | || ||||| || || |||| Sbjct 249866 GGATTTCTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGCAGTGGAAG 249807 Query 58000 GTATATTCTTTTCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGC 58059 | || || ||||| || |||||| || || |||||||||| || || || |||||| Sbjct 249806 GCATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGGATTGATGC 249747 Query 58060 CCGGCCTGACGTTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTG 58119 | || |||| || ||||||| | || ||||||||||| | ||||| ||||||| Sbjct 249746 CAGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATACCGATTTTG 249687 Query 58120 CGTGCCT 58126 | ||||| Sbjct 249686 CTTGCCT 249680 >seq415 Length=258813 Score = 116 bits (128), Expect = 3e-21 Identities = 247/368 (67%), Gaps = 3/368 (1%) Strand=Plus/Plus Query 22505 GTGAACGGTTCGAAAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATC 22564 ||| | || || || |||| ||| || || ||||| |||||| || || ||||| Sbjct 185088 GTGTATGGCTCAAAGCATTCGTTGAAGCCGAGAATCTGGCTGGTCGAGGCAGTAGGCATA 185147 Query 22565 GGCGCCAACAGTAGCGAGTTTCTCAAGCCGTGCTTTGAAATTTTACTCTTGAGCATCGAC 22624 || || | || ||||||||||||||||| ||| | ||| | ||||||| | | Sbjct 185148 GGTGCTAGGAGGAGCGAGTTTCTCAAGCCAGTCTTAGCAATCTGTGCCTTGAGCGAAGGC 185207 Query 22625 CAGTCCCACAGATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCCGCGA 22684 |||||||||| || | || || || |||| | |||||||| | ||| | Sbjct 185208 CAGTCCCACAAGTCAGTGGGAGTAAC---CCCCCAAAGGTCGTATTGGAGTTGGCCTTGT 185264 Query 22685 CTCGCCGGGCTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTC 22744 || || |||||||| | || ||||| ||||||| || || |||||| |||| Sbjct 185265 GAAGCAGGACTGCCTTCCCAAGTCTCGTAGGGACCATCACGAGCAGCGAGTTCGGAGCTG 185324 Query 22745 GCCTCCAACGCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGCGGCG 22804 ||||| | |||| ||| || || ||||||||||| | |||| | ||| || || Sbjct 185325 GCCTCGAGCGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTAAGTTCTTTCGCAGCC 185384 Query 22805 ACGCTTTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATA 22864 | ||| | |||||||| | || ||| || || || | |||||||||||| | | Sbjct 185385 TGGGAATCGAAAGGCATACGAAGAGCCATGAAAGCATCGGCGAGACCCTGAACGCCAAGA 185444 Query 22865 CCGATCGG 22872 || || || Sbjct 185445 CCAATAGG 185452 >seq298 Length=714934 Score = 116 bits (128), Expect = 3e-21 Identities = 153/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| || || |||||||| || ||||| || |||||| |||| || || |||| Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| | || | || || || || ||||||||||||| | || ||||| || Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCAA 385522 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 |||||||| || ||||||||||| ||| | || ||| | || | ||| || ||| Sbjct 385523 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 385582 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 ||||| || || || ||||| ||||| || || Sbjct 385583 ATTCAGAAGGAGTCTACTCTCCATCTCGTCCT 385614 Score = 105 bits (116), Expect = 6e-18 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || || || ||||| || || || || ||||||||| | || || ||| | || Sbjct 385174 CATGCAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTC 385233 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 |||| | | || | || || || || || ||||||||| | || ||||| || Sbjct 385234 TGACACTATTGATAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCA 385293 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAA 31371 ||| ||||| || || |||||||| ||| | |||||| | || || || ||||| Sbjct 385294 GCAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAA 385353 Query 31372 CATTCAAAAAGAATCGACTCTTCATCTGGTACT 31404 |||||| || || || ||||| ||||| || || Sbjct 385354 CATTCAGAAGGAGTCTACTCTCCATCTCGTCCT 385386 >seq433 Length=1580550 Score = 109 bits (120), Expect = 5e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 31193 ATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTCC 31252 |||||||| ||||| ||||| || || ||||| || ||||| |||| || || | ||| Sbjct 1108298 ATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATCC 1108357 Query 31253 GACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCAG 31312 |||| |||| | || || | || ||||||||||||| | || || ||||| Sbjct 1108358 GACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCAA 1108417 Query 31313 CAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTATAAC 31372 || ||||| || || || ||||| || | || || | || | |||||||||| Sbjct 1108418 CAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAAC 1108477 Query 31373 ATTCAAAAAGAATCGACTCTTCATCTGGTACTT 31405 ||||| || |||||||| |||||||| || ||| Sbjct 1108478 ATTCAGAAGGAATCGACCCTTCATCTCGTTCTT 1108510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 31192 CATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCGTC 31251 |||||| || ||||| ||||| || || ||||| || || || |||| || || | || Sbjct 1108069 CATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTC 1108128 Query 31252 CGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGACCA 31311 ||| | |||| | |||||| | || ||||||||| ||| | || |||||||| Sbjct 1108129 CGATACCATCGATAACGTCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 1108188 Query 31312 GCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGA 31347 ||| ||||| || |||||||| || ||| | || || Sbjct 1108189 GCAACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGA 1108224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445762934166240