Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq415 107 4e-18
>seq415
Length=258813
Score = 107 bits (118), Expect = 4e-18
Identities = 177/253 (70%), Gaps = 2/253 (1%)
Strand=Plus/Plus
Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832
||| | || || || | ||| |||||||||||| ||| || || | ||| | ||
Sbjct 186340 ATGGATGTTGAGACCAATTCCACCAGCAGTCTTGCTGATCATGGCACAGTTCTTCAAGGT 186399
Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892
|||||| ||||| || ||| ||| || | | || | ||||||||| ||| | ||
Sbjct 186400 ATCATAGATACCTTCGATGGAATCTTCCTTCATGCAGACAAGGAAGCAGGAGCTCAACTG 186459
Query 94893 GGGTGTGAC-TGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951
|| ||| ||| ||| || || || ||||| || || || || |||||| || |
Sbjct 186460 AGGA-TGAGGTGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGCGTGAAATAGCGCTCTG 186518
Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011
|||| |||| ||| ||||| | ||| || ||||| ||||| ||||||||||| |
Sbjct 186519 ACATCAGATGATAAGTTTCGAGAACACGTTCAATGTCCCGCCCGTGGATGCCGACAGCGA 186578
Query 95012 CACGCATAATCAT 95024
|||||||||||||
Sbjct 186579 CACGCATAATCAT 186591
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989576113634010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |