Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq415 107 4e-18 >seq415 Length=258813 Score = 107 bits (118), Expect = 4e-18 Identities = 177/253 (70%), Gaps = 2/253 (1%) Strand=Plus/Plus Query 94773 ATGAAAGTGGATGCCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGT 94832 ||| | || || || | ||| |||||||||||| ||| || || | ||| | || Sbjct 186340 ATGGATGTTGAGACCAATTCCACCAGCAGTCTTGCTGATCATGGCACAGTTCTTCAAGGT 186399 Query 94833 ATCATAAATACCCTCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTG 94892 |||||| ||||| || ||| ||| || | | || | ||||||||| ||| | || Sbjct 186400 ATCATAGATACCTTCGATGGAATCTTCCTTCATGCAGACAAGGAAGCAGGAGCTCAACTG 186459 Query 94893 GGGTGTGAC-TGTTCCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCG 94951 || ||| ||| ||| || || || ||||| || || || || |||||| || | Sbjct 186460 AGGA-TGAGGTGTACCAGCGTTGAAGAGGGTGGGCGAGGCGTGCGTGAAATAGCGCTCTG 186518 Query 94952 ACATGAGATCATATGTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCA 95011 |||| |||| ||| ||||| | ||| || ||||| ||||| ||||||||||| | Sbjct 186519 ACATCAGATGATAAGTTTCGAGAACACGTTCAATGTCCCGCCCGTGGATGCCGACAGCGA 186578 Query 95012 CACGCATAATCAT 95024 ||||||||||||| Sbjct 186579 CACGCATAATCAT 186591 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989576113634010