Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq370 132 6e-26 >seq370 Length=376741 Score = 132 bits (146), Expect = 6e-26 Identities = 293/439 (67%), Gaps = 3/439 (1%) Strand=Plus/Plus Query 33571 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAG 33630 ||| || || || || |||||| |||| |||||||| | ||| |||| ||||| | Sbjct 249672 TAAGCAGCAGGCAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGG 249731 Query 33631 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATC 33690 | || || | ||| ||||| | || |||||| | | |||||| |||| ||| || |||| Sbjct 249732 AGAAAGTCAATCCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATC 249791 Query 33691 CGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGC 33750 | ||||| || || ||||| ||||| || || |||| ||| | ||| | | ||| Sbjct 249792 CTGAAAAAAAAATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATG 249851 Query 33751 TGTC---ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 33807 | || | ||||| || ||||| || ||||| | || | | |||| || |||| Sbjct 249852 TCTCGGTAGAAATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTT 249911 Query 33808 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33867 | || || |||||| ||| ||| | | ||| || | ||||| || || | | Sbjct 249912 CGATCGCCCGGAAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGA 249971 Query 33868 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33927 | |||| || || || | ||||| || || ||||| || |||||||| | | Sbjct 249972 GGGAATACGCCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACGGG 250031 Query 33928 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987 |||| | |||||||||||| | | || ||||| | | || || || || || |||| Sbjct 250032 CCTCCGCAATCTGCACTTCACTCGAGAAGCGTTCCACAAGGTTCTCGTTGACAATGCCAT 250091 Query 33988 CACTGGCTGCAAAAAACGC 34006 | | ||||| ||||| Sbjct 250092 CCGAAGAGGCAAAGAACGC 250110 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629812703168160