Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq370 141 1e-28 >seq370 Length=376741 Score = 141 bits (156), Expect = 1e-28 Identities = 365/555 (66%), Gaps = 7/555 (1%) Strand=Plus/Plus Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008 ||| || || || || |||||| |||| |||||||| | ||| ||||| ||||||| Sbjct 249672 TAAGCAGCAGGCAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGG 249731 Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACC 50068 | || || | ||| ||||| | || |||||| | | |||||| |||| ||||| || | Sbjct 249732 AGAAAGTCAATCCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATC 249791 Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC 50128 | ||||| || || ||||| ||||| || || |||||||| | ||| | || || | Sbjct 249792 CTGAAAAAAAAATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTC--CGAAAATGCGGA 249849 Query 50129 TGTCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 |||| | ||||| || ||||| || ||||| | || | | |||| || || Sbjct 249850 TGTCTCGGTAGAAATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGT 249909 Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243 ||| || || |||||| ||| ||| | | ||| || | ||||| || || | Sbjct 249910 TTCGATCGCCCGGAAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAG 249969 Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303 || |||| || || || | ||||| || || ||||| || |||||||| | Sbjct 249970 GAGGGAATACGCCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACG 250029 Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363 ||||| | |||||||||||| | | || ||||| | | || || || || || || Sbjct 250030 GGCCTCCGCAATCTGCACTTCACTCGAGAAGCGTTCCACAAGGTTCTCGTTGACAATGCC 250089 Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423 || | ||||| ||||| | || | | || || ||| ||| || Sbjct 250090 ATCCGAAGAGGCAAAGAACGCGAGAACGCGCGAAAGGAAGTGGCGTTCCGGATCTGTCAG 250149 Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483 || |||| || | |||| | |||| || | |||||| || ||||| || || || Sbjct 250150 GTTCATCCAGTCCCAGGTATCATGCGATAAGTCAATTTCTTCGACAGTCCAGAACGAAGC 250209 Query 50484 CTCTGCCTTTTTATA 50498 || |||||| || || Sbjct 250210 CTGTGCCTTCTTGTA 250224 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718263215460080