Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq370 141 1e-28
>seq370
Length=376741
Score = 141 bits (156), Expect = 1e-28
Identities = 365/555 (66%), Gaps = 7/555 (1%)
Strand=Plus/Plus
Query 49949 TAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGG 50008
||| || || || || |||||| |||| |||||||| | ||| ||||| |||||||
Sbjct 249672 TAAGCAGCAGGCAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGG 249731
Query 50009 AAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACC 50068
| || || | ||| ||||| | || |||||| | | |||||| |||| ||||| || |
Sbjct 249732 AGAAAGTCAATCCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATC 249791
Query 50069 CAGAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC 50128
| ||||| || || ||||| ||||| || || |||||||| | ||| | || || |
Sbjct 249792 CTGAAAAAAAAATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTC--CGAAAATGCGGA 249849
Query 50129 TGTCATGT-----ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183
|||| | ||||| || ||||| || ||||| | || | | |||| || ||
Sbjct 249850 TGTCTCGGTAGAAATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGT 249909
Query 50184 TTCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAA 50243
||| || || |||||| ||| ||| | | ||| || | ||||| || || |
Sbjct 249910 TTCGATCGCCCGGAAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAG 249969
Query 50244 AAGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCT 50303
|| |||| || || || | ||||| || || ||||| || |||||||| |
Sbjct 249970 GAGGGAATACGCCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACG 250029
Query 50304 AGCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCC 50363
||||| | |||||||||||| | | || ||||| | | || || || || || ||
Sbjct 250030 GGCCTCCGCAATCTGCACTTCACTCGAGAAGCGTTCCACAAGGTTCTCGTTGACAATGCC 250089
Query 50364 GTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAG 50423
|| | ||||| ||||| | || | | || || ||| ||| ||
Sbjct 250090 ATCCGAAGAGGCAAAGAACGCGAGAACGCGCGAAAGGAAGTGGCGTTCCGGATCTGTCAG 250149
Query 50424 TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGC 50483
|| |||| || | |||| | |||| || | |||||| || ||||| || || ||
Sbjct 250150 GTTCATCCAGTCCCAGGTATCATGCGATAAGTCAATTTCTTCGACAGTCCAGAACGAAGC 250209
Query 50484 CTCTGCCTTTTTATA 50498
|| |||||| || ||
Sbjct 250210 CTGTGCCTTCTTGTA 250224
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718263215460080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |