Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_004002.1
Length=149955
Score E
Sequences producing significant alignments: (Bits) Value
seq370 129 6e-25
>seq370
Length=376741
Score = 129 bits (142), Expect = 6e-25
Identities = 244/357 (68%), Gaps = 4/357 (1%)
Strand=Plus/Plus
Query 13872 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13931
|| |||||||| ||| | |||||| || | ||| || || ||||| || || || |||
Sbjct 249683 CAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAAT 249742
Query 13932 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAAT 13991
||||||||||||||||| ||| | | |||||| || |||||||| || || ||||| ||
Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802
Query 13992 ATTCCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGAT 14051
|| || || ||||| || || || | | || || ||| | | | | | | | ||
Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATGTCTCGGTAGAA 249862
Query 14052 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTA 14111
|||||||| |||||||| | |||| || ||| || || ||||| || ||
Sbjct 249863 ATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGG 249922
Query 14112 AATAAATATTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATACA 14169
|| | | | ||| || | || | |||| ||||| || ||||| || | | ||||
Sbjct 249923 AAGAGAAAGTCCCGTTCGTCAGGATCCTTG--ATGTAAGTGTCAATTAGGAGGGAATACG 249980
Query 14170 TTTCAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAGCATCTAGCTTCCG 14226
|| ||||| | ||||| || || ||||||||||| || || | || ||||
Sbjct 249981 CCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACGGGCCTCCG 250037
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 479724270114800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |