Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_004003.1
Length=149599
Score E
Sequences producing significant alignments: (Bits) Value
seq370 145 7e-30
>seq370
Length=376741
Score = 145 bits (160), Expect = 7e-30
Identities = 243/347 (70%), Gaps = 6/347 (2%)
Strand=Plus/Plus
Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719
|| |||||||| ||| | |||||| || | ||| || || ||||| || || || |||
Sbjct 249683 CAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAAT 249742
Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779
||||||||||||||||| ||| | | |||||| || ||||| || ||||| ||||| ||
Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802
Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839
|| || || ||||| || || || | || || || ||| | | | | | | | ||
Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATGTCTCGGTAGAA 249862
Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899
|||||||| |||||||| | |||| || ||| || || |||||||| || |
Sbjct 249863 ATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGG 249922
Query 13900 AATA-AATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956
|| | || || || | || | || | |||| ||||| || ||||| || | | ||||
Sbjct 249923 AAGAGAAAGTCCCGT-TCGTCAGGATCCTTG--ATGTAAGTGTCAATTAGGAGGGAATAC 249979
Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003
|| ||||| | ||||| || || ||||||||||| |||||
Sbjct 249980 GCCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACA 250026
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478585078972080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |