Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq370 145 7e-30 >seq370 Length=376741 Score = 145 bits (160), Expect = 7e-30 Identities = 243/347 (70%), Gaps = 6/347 (2%) Strand=Plus/Plus Query 13660 CACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAAT 13719 || |||||||| ||| | |||||| || | ||| || || ||||| || || || ||| Sbjct 249683 CAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAAT 249742 Query 13720 CCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAAT 13779 ||||||||||||||||| ||| | | |||||| || ||||| || ||||| ||||| || Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802 Query 13780 ATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGAT 13839 || || || ||||| || || || | || || || ||| | | | | | | | || Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAATGCGGATGTCTCGGTAGAA 249862 Query 13840 ATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCGATTGCATTG 13899 |||||||| |||||||| | |||| || ||| || || |||||||| || | Sbjct 249863 ATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGG 249922 Query 13900 AATA-AATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAATAAGTAAGCTATAC 13956 || | || || || | || | || | |||| ||||| || ||||| || | | |||| Sbjct 249923 AAGAGAAAGTCCCGT-TCGTCAGGATCCTTG--ATGTAAGTGTCAATTAGGAGGGAATAC 249979 Query 13957 ATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAACA 14003 || ||||| | ||||| || || ||||||||||| ||||| Sbjct 249980 GCCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACA 250026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478585078972080