Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq370 156 6e-33 >seq370 Length=376741 Score = 156 bits (172), Expect = 6e-33 Identities = 380/571 (67%), Gaps = 10/571 (2%) Strand=Plus/Plus Query 125019 ATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAGGTCGATCTG 125078 || ||| |||||||||| |||||| | |||||||| ||||| | ||| ||| | || || Sbjct 251271 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACCTC 251330 Query 125079 TCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAGTTTATATCG 125138 ||||||||||| | || ||| | | || | | || | ||||| | || || || Sbjct 251331 TCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGACAACGAGCGTCACTTCATCTCA 251390 Query 125139 CACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCTGTTGACACGA 125198 || | | |||||||| |||| ||| ||||| ||||||||||| || || || || Sbjct 251391 CATGTCCTCGCCTTCTTCGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTGGAGCGC 251450 Query 125199 TTCTCTCAAGAGTTGACCATTC--CAGAGGTGTCGTGCTTTTACGGATTCCAAATCATGA 125256 ||||| ||| | | ||| | | |||| || || || || ||||||||||||| Sbjct 251451 TTCTC-CAA-TGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCATGA 251508 Query 125257 TTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATTCGCGATC--- 125313 | |||||| | || || || | ||||| || || |||| ||||| || | Sbjct 251509 TGGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCCCG 251568 Query 125314 CGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGTAAAAAGG 125373 | || || || || ||||| |||| | ||||| | || | || || || | Sbjct 251569 CCCAGCGCGAATAC---CTCTTCGACGCCGTTGACACTATCCCTTGCATCAAGAAGAAAG 251625 Query 125374 CTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGACTGGTGG 125433 | | |||| | |||||| || | ||||| | | ||||| | || || | Sbjct 251626 CCGACTGGGCTCTCACCTGGATCTCCGATAAAGAGTCTACCTTTGCCGAACGTCTAGTTG 251685 Query 125434 CATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTTTGGCTCA 125493 | ||||| || || |||||||| ||||| || || ||| || ||||||| ||| | | Sbjct 251686 CCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGTTGA 251745 Query 125494 AGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGAGACGAGG 125553 ||||||| || ||||||||||| |||| | ||||||| | || || || || | Sbjct 251746 AGAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTGATGAAG 251805 Query 125554 GCCTACACTGTGACTTTGCCATTCTACTGTT 125584 || | || || |||||| |||||||| Sbjct 251806 GCATGCATACCGATTTTGCCTGCCTACTGTT 251836 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741053438264720