Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq298 143 6e-29
seq433 141 2e-28
seq370 93.3 1e-13
>seq298
Length=714934
Score = 143 bits (158), Expect = 6e-29
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||| || |||||||| ||||||||||| || || | |||||||
Sbjct 385386 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCT 385327
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || |||||||| || || | || ||||| ||||| || ||||| |||||
Sbjct 385326 TCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCT 385267
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|| ||||| || || || || || | || || || ||| ||||| || || || |||
Sbjct 385266 TGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTC 385207
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || || || ||||| ||||||||
Sbjct 385206 TTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175
Score = 134 bits (148), Expect = 3e-26
Identities = 157/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 104348 AGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCT 104407
|| || ||||| | ||||| || |||||||| || ||||| || || || | ||||||
Sbjct 385614 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 385555
Query 104408 TCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCC 104467
|| || || || ||||| || || || | ||||||||| || || || ||||| || |||
Sbjct 385554 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC 385495
Query 104468 TGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTC 104527
|||||||| || || || || || | ||| || | || ||||| || || || |||
Sbjct 385494 TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTC 385435
Query 104528 TTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||||||| || || ||||| || |||||
Sbjct 385434 TTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403
Score = 120 bits (132), Expect = 7e-22
Identities = 141/191 (74%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
|| |||||||| || || ||||| ||||| | || ||||| ||||| || ||||||||
Sbjct 385821 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCAGCAAAG 385762
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| || | |||||| || || || || || || || ||||||||||| ||||| |||||
Sbjct 385761 ATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTCGCTTTGACATTG 385702
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | ||| || | || || || || || || ||||| || ||||| || || ||
Sbjct 385701 TCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACG 385642
Query 104549 AATATCTGCAT 104559
|| || |||||
Sbjct 385641 AAGATTTGCAT 385631
>seq433
Length=1580550
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || ||||| | |||||| |||||||| || || |||||||| || || | || ||
Sbjct 1108738 AAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATC 1108679
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||||| || |||||||| || || || | ||||| |||||||| || || || || ||
Sbjct 1108678 CTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTC 1108619
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
||||||||| || || ||||| || | ||| ||| | || ||||| | || || ||
Sbjct 1108618 CTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGT 1108559
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| || ||||| || || || || ||||||||
Sbjct 1108558 CTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526
Score = 141 bits (156), Expect = 2e-28
Identities = 159/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 104347 AAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTC 104406
||| || || || | || || || |||||||| || || ||||| || || | ||| ||
Sbjct 1108966 AAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATC 1108907
Query 104407 TTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATC 104466
||| || ||||| || || || || || | |||||||||||| || || ||||| |||||
Sbjct 1108906 TTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATC 1108847
Query 104467 CTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGT 104526
|||||||| || || ||||| || | || ||| || ||| ||||| || || || ||
Sbjct 1108846 TTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGT 1108787
Query 104527 CTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
||| ||||| || || || || || ||||||||
Sbjct 1108786 CTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
>seq370
Length=376741
Score = 93.3 bits (102), Expect = 1e-13
Identities = 108/146 (74%), Gaps = 0/146 (0%)
Strand=Plus/Minus
Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197
|||||||| || || || ||||| || || ||||| || || ||||| || |||||||||
Sbjct 249828 GTTGCTTTCGCAGCAGTGGAAGGCATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGG 249769
Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257
||| || |||| | ||||||||||| |||||||| ||||| | || || | |||
Sbjct 249768 ATGAGAAAGCGAGGATTGATGCCAGGATTGACTTTCTCCAACGAGCTAATCAGTCGCGAC 249709
Query 269258 GAAGGTTTACACTGCGACTTCGCTTG 269283
|| || | || ||| || |||||
Sbjct 249708 GAGGGCATGCATACCGATTTTGCTTG 249683
Score = 89.7 bits (98), Expect = 1e-12
Identities = 96/127 (76%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 269136 TAGTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTT 269195
||||||| || || ||||| || || || ||||| || || ||||| || | ||||| |
Sbjct 251680 TAGTTGCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCT 251739
Query 269196 GGTTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGG 269255
|||||||||| | || || ||||| || || || ||||||||||| | || ||| | |
Sbjct 251740 GGTTGAAGAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTG 251799
Query 269256 ACGAAGG 269262
| |||||
Sbjct 251800 ATGAAGG 251806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151389224074376
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |