Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq399 89.7 3e-13
seq196 89.7 3e-13
>seq399
Length=154841
Score = 89.7 bits (98), Expect = 3e-13
Identities = 59/66 (89%), Gaps = 0/66 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 50459 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 50518
Query 11528 CCGTCG 11533
||| ||
Sbjct 50519 CCGACG 50524
Score = 87.8 bits (96), Expect = 9e-13
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Minus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 52945 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 52886
Query 11528 CC 11529
||
Sbjct 52885 CC 52884
>seq196
Length=32890
Score = 89.7 bits (98), Expect = 3e-13
Identities = 57/63 (90%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 1607 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 1666
Query 11528 CCG 11530
|||
Sbjct 1667 CCG 1669
Score = 89.7 bits (98), Expect = 3e-13
Identities = 73/88 (83%), Gaps = 1/88 (1%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
|||||| | || ||||| | | |||||||||| ||||||||||||||||||||||
Sbjct 17359 AAAAAACCCTATATGGCCAACGTGGGGATCGAACCCAAGACCTTCGCGTTATTAGCACGA 17300
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCCG 11530
|||||| ||||||||||||| | |||||
Sbjct 17299 CGCTCTAACCAACTGAGCTAGTCGGCCG 17272
Score = 89.7 bits (98), Expect = 3e-13
Identities = 57/63 (90%), Gaps = 0/63 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 22627 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 22686
Query 11528 CCG 11530
|||
Sbjct 22687 CCG 22689
Score = 87.8 bits (96), Expect = 9e-13
Identities = 56/62 (90%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| |||||||||||||||||||||||||||| ||||||||||||| | ||
Sbjct 5898 GGATCGAACCCAAGACCTTCGCGTTATTAGCACGACGCTCTAACCAACTGAGCTAGTCGG 5957
Query 11528 CC 11529
||
Sbjct 5958 CC 5959
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261489217733272
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |