Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq298 98.7 9e-16
seq433 84.2 2e-11
>seq298
Length=714934
Score = 98.7 bits (108), Expect = 9e-16
Identities = 143/200 (72%), Gaps = 4/200 (2%)
Strand=Plus/Minus
Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA--TCCTCCAGCTGTTTT 94867
|||||| ||||| || | ||| || ||| | || || || ||||| ||||| ||
Sbjct 385600 AGTAGACTCCTTCTGAATGTTGTAGTCGG--AGAGGGTGCGACCGTCCTCGAGCTGCTTG 385543
Query 94868 CCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCC 94927
|| | ||||| | | || ||||| || ||||| ||||| ||||| | ||| || |||
Sbjct 385542 CCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCC 385483
Query 94928 TTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGA 94987
|| ||| | | | ||||||| ||||| || | ||||| || || |||||||||
Sbjct 385482 TTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGA 385423
Query 94988 GTTTTCACAAAGATCTGCAT 95007
|| ||||||||||| |||||
Sbjct 385422 GTCTTCACAAAGATTTGCAT 385403
Score = 91.5 bits (100), Expect = 1e-13
Identities = 140/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 94810 AGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCC 94869
|||||| ||||| || | |||||| || || ||| || || ||||| || ||
Sbjct 385372 AGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCC 385313
Query 94870 GCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTT 94929
||||||| | | ||||||||| ||||| || ||||| || || | || || |||||
Sbjct 385312 AGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTT 385253
Query 94930 GACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGT 94989
||| | | |||||||| || || |||| ||||| || || || || || ||
Sbjct 385252 CACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGT 385193
Query 94990 TTTCACAAAGATCTGCATGC 95009
|| ||||||||||||||||
Sbjct 385192 CTTGACAAAGATCTGCATGC 385173
>seq433
Length=1580550
Score = 84.2 bits (92), Expect = 2e-11
Identities = 112/156 (72%), Gaps = 0/156 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
||| || |||||||| ||| | ||||| | | || ||||| || ||||||||||| ||
Sbjct 1108909 ATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTT 1108850
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
|| | ||| || ||||| || | | | ||||| | ||||| || | |||||
Sbjct 1108849 ATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGAT 1108790
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||| || ||||| || || || || |||||||||||
Sbjct 1108789 GGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
Score = 82.4 bits (90), Expect = 7e-11
Identities = 113/158 (72%), Gaps = 0/158 (0%)
Strand=Plus/Minus
Query 94852 ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTT 94911
|||||| ||||| ||||| | ||||| | | ||| || || ||||| || || || ||
Sbjct 1108681 ATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTT 1108622
Query 94912 GTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGAT 94971
||| | ||| || |||||||| | | ||||| | || || || | ||||||
Sbjct 1108621 GTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGAT 1108562
Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009
||| || || ||||| || || || |||||||||||||
Sbjct 1108561 GGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCATGC 1108524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448287714535920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |