Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq370 113 5e-20 >seq370 Length=376741 Score = 113 bits (124), Expect = 5e-20 Identities = 136/185 (74%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || |||||||| ||||| |||||||| | || || | || ||||| ||||| || Sbjct 251827 CAGGCAAAATCGGTATGCATGCCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAG 251768 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595 |||||||| | || | ||| || ||||| || || || || || | || || |||||| Sbjct 251767 CCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAA 251708 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAGATTCTTTATCCAAT 21655 |||||||| || ||||| || ||||||| ||||| | | ||||| |||||||| | Sbjct 251707 ATGCCCTCCACAGCAGCGAAGGCAACTAGACGTTCGGCAAAGGTAGACTCTTTATCGGAG 251648 Query 21656 ATCCA 21660 ||||| Sbjct 251647 ATCCA 251643 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531896664471280