Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq370 145 2e-29 seq415 141 2e-28 >seq370 Length=376741 Score = 145 bits (160), Expect = 2e-29 Identities = 254/364 (70%), Gaps = 13/364 (4%) Strand=Plus/Minus Query 22294 GAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAAATGTTCACGCGGAAACATAT 22353 |||||| | |||||||||||| | ||||| ||||| |||||||| ||| | || | ||| Sbjct 250035 GAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGTGCACTCCGAGGCGTAT 249976 Query 22354 TCTATGATGCTACAGTCACT--CGTAGAAGATAAAGACGAACAACGAAACTTA---TTCC 22408 || | | | | |||| | | | ||| ||||||| | |||| |||| Sbjct 249975 TCCCTCCTAATTGA--CACTTACATCAAGGATCCTGACGAAC---GGGACTTTCTCTTCC 249921 Query 22409 GCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGGGCGCTGAAATGGATGA 22468 | ||||| ||||||| || || ||| | |||||||| ||||| |||||||||| Sbjct 249920 GGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGCATTGAAATGGATTT 249861 Query 22469 ACAATGA-ACGTTC--ATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTT 22525 | || || | | ||| |||| || ||| |||| || || | || |||||||||| Sbjct 249860 CTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGCAGTGGAAGGCATTT 249801 Query 22526 TCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTC 22585 | ||||| ||| | ||| ||| ||||||||| | | ||| || | | | ||||| || Sbjct 249800 TTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGGATTGATGCCAGGAT 249741 Query 22586 TAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTGTA 22645 | || || || || ||| |||| || || || ||||| | |||||||||||||| || Sbjct 249740 TGACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATACCGATTTTGCTTGCC 249681 Query 22646 TGCT 22649 |||| Sbjct 249680 TGCT 249677 >seq415 Length=258813 Score = 141 bits (156), Expect = 2e-28 Identities = 402/615 (65%), Gaps = 61/615 (10%) Strand=Plus/Minus Query 363415 TCCTACCTATCTC-GTATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCG 363473 || ||||| |||| | ||||||||| ||| ||||| || || || ||| | ||||| Sbjct 186639 TCTTACCT-TCTCCGCATCAATGGTCGCGTTGCAGAACGACCACAACAAATGATTATGCG 186581 Query 363474 TGTTGCTATTGGTATCCATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCT--T 363531 ||| ||| | || ||||| | | ||| |||| | | ||||| ||| | || | Sbjct 186580 TGTCGCTGTCGGCATCCACGGGCGGGACATTGAACGTGTTCTCGAAACTTATCATCTGAT 186521 Query 363532 CTAAGTGCTCGTGTATTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAAT 363591 | || || | | | |||||||||||| |||| || | | ||| ||||| || | | || Sbjct 186520 GTCAGAGCGC-TAT-TTCACGCACGCCTCGCCCACCCTCTTCAACGCTGGTACACCTCAT 186463 Query 363592 CCACAGATGTCTTCTTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTT 363651 || ||| || || ||||| ||| | |||||||| ||||||||||| ||||||| | Sbjct 186462 CCTCAGTTGAGCTCCTGCTTCCTTGTCTGCATGAAGGAAGATTCCATCGAAGGTATCTAT 186403 Query 363652 GACACACTTAAGAATTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATC 363711 || || | ||||| ||||| | || ||||| ||| || ||||||||| | ||| Sbjct 186402 GATACCTTGAAGAACTGTGCCATGATCAGCAAGACTGCTGGTGGAATTGGTCTCAACATC 186343 Query 363712 CACAATGTTCGTG-CAC------AGA-------------------ACAGTTA-CATTC-- 363742 || | | | |||| ||| ||| |||||| ||||| Sbjct 186342 CATAGTATCCGTGCCACTGGGTAAGATTTCTCTGCCATATCCCTTTCAGTTAGCATTCAA 186283 Query 363743 ----------------------GC-GGCACAGGGGGATACTCGAATGGGCTGGTTCCCAT 363779 || || || || ||||| || || | |||||||| Sbjct 186282 CTGTCGTCCTAGATCATACATTGCTGGAACCAACGGGTACTCCAACGGTATTGTTCCCAT 186223 Query 363780 GCTTCGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGG 363839 |||||||| || ||| ||| || | || |||||||| || || || ||| || Sbjct 186222 GCTTCGTGCGTACGACGCTACCGCCCGTTATGTCGACCAAGGAGGTAACAAACGCCCCGG 186163 Query 363840 GGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCG 363899 || |||||||| || ||||||| || |||||| | || || ||| | || ||||| Sbjct 186162 TGCCTTTGCTATCTACATCGAGCCATGGCACGCCGATGTCTTCGAATTTTTGGACCTCCG 186103 Query 363900 GAA-AAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTT 363958 || || |||||| || || ||| | ||||| |||||| |||||||||| |||||| || Sbjct 186102 AAAGAACCACGGG-AAGGAAGAAGTTCGTGCTCGTGATTTGTTCTATGCTCTTTGGATTC 186044 Query 363959 CTGACCATTTTATGA 363973 | || | |||| ||| Sbjct 186043 CCGATC-TTTTGTGA 186030 Score = 123 bits (136), Expect = 6e-23 Identities = 182/258 (71%), Gaps = 0/258 (0%) Strand=Plus/Minus Query 364234 AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAGACTGCCGTATGTAACCTT 364293 ||||| || || ||||| || |||||| || | || ||||| || ||||| ||||||||| Sbjct 185668 AACCTTTGCACGGAGATCATCGAATACTCCTCCCCTGACGAAACCGCCGTTTGTAACCTT 185609 Query 364294 GCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATGGTACTTTTGACCACCAGCATCTTTAT 364353 ||||| |||||||||| | || | || |||||| | ||| | || | ||| | Sbjct 185608 GCGTCCCTCGCGCTTCCCTCTTTCATTAAGGATGGTGTCTACGACTTCAAGAAGCTTCAC 185549 Query 364354 GACGTAACCTATCATGCTACTTGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCA 364413 || || || | || | | | || ||| ||||| | || ||| || || || || Sbjct 185548 GAAGTCGCCAAAGTTGTTGCCTATAACCTCAACAAGATCATTGACGTCAACTACTACCCC 185489 Query 364414 ATTCCTGAAGCCGAGCGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGC 364473 || |||||||| || || || |||||||| | || ||||||||||| || ||||| Sbjct 185488 ATCCCTGAAGCTCGCCGGTCCAACATGCGTCACAGGCCTATTGGTCTTGGCGTTCAGGGT 185429 Query 364474 CTCGCTGACGTTTTTATG 364491 ||||| || | ||| ||| Sbjct 185428 CTCGCCGATGCTTTCATG 185411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303343213086404