Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq433 113 4e-20 seq298 98.7 9e-16 seq370 87.8 2e-12 >seq433 Length=1580550 Score = 113 bits (124), Expect = 4e-20 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 23990 AATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAA 24049 ||||||| | || || || || | ||||| || | || || |||| |||||| | Sbjct 1108297 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATC 1108356 Query 24050 CGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | || || ||||| ||||| |||||||| ||||| || || Sbjct 1108357 CGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 1108416 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || |||| | ||||||||||||||| |||| | | | || ||||||||| Sbjct 1108417 ACAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAA 1108476 Query 24170 CATTCAAAAAGAATCTACAATTCAT 24194 |||||| || ||||| || ||||| Sbjct 1108477 CATTCAGAAGGAATCGACCCTTCAT 1108501 >seq298 Length=714934 Score = 98.7 bits (108), Expect = 9e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| || || | ||||| || | || ||| |||| |||||| | Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||| || | || || |||||| ||||| |||||||| || ||||||||| Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCAA 385522 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||| | || || | || |||||||| ||||| || | | | | || ||| || ||| Sbjct 385523 CAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAAC 385582 Query 24171 ATTCAAAAAGAATCTAC 24187 ||||| || || ||||| Sbjct 385583 ATTCAGAAGGAGTCTAC 385599 >seq370 Length=376741 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/158 (72%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 104602 ACTCGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAA 104661 ||||| |||||||| || ||||||||||||| || ||||| ||| ||| || |||||| Sbjct 252159 ACTCGCTTTTCAAAGAAGTTAGTCTTGCCCTGCAATGAAATCATATCCATGAAGTCGAAA 252100 Query 104662 GGATTCAAAGTCTTAAAATATTTTTCGTAGCCAAGCTCGATCAACAGTCGATCCGCCACA 104721 || ||| | | || | ||| || | |||||| || | |||||| || || ||| Sbjct 252099 GGGTTCGACTTGTTGTAGACTTTCTCATTGCCAAGAGAGACGAGCAGTCGGTCAGCAACA 252040 Query 104722 AATTCGATGTACTCGCACATAGAATGTGCATTCATGCC 104759 || || || || | |||||| ||| | |||||||| Sbjct 252039 AACTCAATATATTGGCACATCAAATCGGAGTTCATGCC 252002 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429932740816410