Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq367 120 3e-22
seq298 113 4e-20
seq433 96.9 3e-15
seq353 86.0 6e-12
>seq367
Length=894951
Score = 120 bits (132), Expect = 3e-22
Identities = 101/124 (81%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| ||||| || || | ||| ||||||||||| |||||||| |||||
Sbjct 540822 CCACCACGGAGACGGAGCACCAAGTGAAGGGTAGACTCCTTTTGGATGTTGTAGTCGCTG 540763
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| ||| |||| || ||||||||||| ||||||
Sbjct 540762 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATCAATCGCTGCTGGTCGGGAGGG 540703
Query 131128 ATTC 131131
||||
Sbjct 540702 ATTC 540699
>seq298
Length=714934
Score = 113 bits (124), Expect = 4e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | ||| | || |||||||| ||||||||||| |||
Sbjct 385629 CCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAG 385570
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| |||||| ||||||||||| ||| |||| | |||||| || || || ||
Sbjct 385569 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGA 385510
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| ||||| || ||| ||| | | || | || || | |||||||
Sbjct 385509 ATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACC 385450
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| ||| | || || || || ||||| || || || || |||||
Sbjct 385449 TCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|| ||||| | ||| || || | ||| | || |||||||| |||||||| || || |
Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||| || ||||||||||| || |||| | ||| ||||| || ||||||
Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || ||| ||| ||| | | || | ||| || | || || |
Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238
|| | ||| | || || ||||| || || || || || ||||||||| ||
Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCATGCCT 385171
>seq433
Length=1580550
Score = 96.9 bits (106), Expect = 3e-15
Identities = 151/216 (70%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| || || | ||| | || ||||| || || |||||||| || | |||||||
Sbjct 1108740 CGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCA 1108681
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139
|||||||||||||| || ||| |||| | ||| || ||||| |||||||| || || |||
Sbjct 1108680 TCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTG 1108621
Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199
|| || || ||||| | || | || |||| ||||| | || | || | |
Sbjct 1108620 TCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATG 1108561
Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235
|| || || || || || || ||||| |||||||||
Sbjct 1108560 GTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCATG 1108525
Score = 91.5 bits (100), Expect = 1e-13
Identities = 95/125 (76%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| |||| ||| || || | ||||| || || ||||| || || ||||||||
Sbjct 1108069 GCCACCACGCAGACGAAGGACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGA 1108010
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
| |||||| |||||| ||||||||||| ||| |||| | ||| || ||||| |||||
Sbjct 1108009 GAGAGTGCGCCCGTCCTCAAGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTCTGGAGG 1107950
Query 131127 GATTC 131131
||||
Sbjct 1107949 AATTC 1107945
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || | || | ||| |||||||| ||||||||||||||
Sbjct 1108980 CCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 1108921
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| || || || || ||||| ||||| ||| |||| | |||||| || || || ||
Sbjct 1108920 AGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGA 1108861
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| ||||| || || || || ||| | | || | || |||| || ||||
Sbjct 1108860 ATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACC 1108801
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||| || | ||| || || || || || || ||||| ||||||||
Sbjct 1108800 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
>seq353
Length=244416
Score = 86.0 bits (94), Expect = 6e-12
Identities = 86/112 (77%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079
|| || || || || | ||| |||||||| || |||||||| ||||| | ||||||
Sbjct 157188 CGAAGGACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGCTGAGGGTGCGACCA 157129
Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTC 131131
||||| ||||||||||| ||| |||| || || || ||||| || || ||||
Sbjct 157128 TCCTCGAGCTGCTTGCCAGCGAAGATCAATCGTTGTTGGTCAGGGGGAATTC 157077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472009130100480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |