Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq433 123 2e-23 seq298 122 8e-23 >seq433 Length=1580550 Score = 123 bits (136), Expect = 2e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057 ||||||||| || || ||||| | || || || ||||||| |||| || ||||| || Sbjct 1108297 AATGCAAATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAGTCATC 1108356 Query 25058 TGACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| ||||| ||||| || ||| ||||| ||||| || || |||||||| Sbjct 1108357 CGACACCATCGACAATGTGAAGGCCAAGATCCAGGACAAGGAAGGCATCCCTCCTGACCA 1108416 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||| || | |||||||||||||| ||| | || |||| ||| || | |||||| || Sbjct 1108417 ACAACGTCTCATTTTTGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGATTATAA 1108476 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || ||||| || || ||| | || || Sbjct 1108477 CATTCAGAAGGAATCGACCCTTCATCTCGTTCT 1108509 Score = 105 bits (116), Expect = 6e-18 Identities = 170/242 (70%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || || || || Sbjct 1108754 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCC 1108813 Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || ||||| | || | ||| || || ||||| ||||| ||||| || Sbjct 1108814 GACACAATTGACAATGTGAAGGCTAAGATTCAA-GATAAGGAAGGTATTCCCCCTGATCA 1108872 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| |||| || ||||||||||| | ||||||| ||| || | |||||||| Sbjct 1108873 ACAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCTGATTACAA 1108932 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATTATAC 25237 ||||| || || ||||| || || | || || | || | || || ||||| ||| Sbjct 1108933 CATTCAGAAGGAGTCCACCCTCCACCTTGTTCTTCGTCTCCGTGGTGGTAATTAAGTTAC 1108992 Query 25238 TA 25239 || Sbjct 1108993 TA 1108994 >seq298 Length=714934 Score = 122 bits (134), Expect = 8e-23 Identities = 145/194 (75%), Gaps = 6/194 (3%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| || || ||||| | ||||| || ||||||| | ||||| ||||| ||| Sbjct 385631 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCT 385690 Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115 ||||| || || || || |||| || | ||| ||||| || || ||||| || ||| Sbjct 385691 GACACCATTGA--CAATGTCAAAGCGAAGATTCAG-GACAAGGAGGGTATTCCCCCCGAC 385747 Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175 |||||||| |||| ||||| ||||| ||| | ||||||| |||||| | |||||| Sbjct 385748 CAACAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTAC 385807 Query 25176 AATATTCAAAAAGA 25189 || ||||| || || Sbjct 385808 AACATTCAGAAGGA 385821 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| |||||| | || || || | ||||| |||| || ||||||||| Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 25059 GACACTATCGA-GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || || | | | || || | ||| ||||| ||||| ||||| || || || Sbjct 385463 GACACCATTGACAACGTTAAGGCGAAGATTCA-GGACAAGGAAGGCATTCCCCCCGATCA 385521 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 |||||| | || || || ||||| || | || || | |||||| | ||| ||||| Sbjct 385522 ACAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 385581 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || ||| | || || Sbjct 385582 CATTCAGAAGGAGTCTACTCTCCATCTCGTCCT 385614 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | ||||| || | ||||| | || ||||| || ||| Sbjct 385175 ATGCAGATCTTTGTCAAGACCCTCACCGGGAAGACGATCACCCTTGAGGTGGAATCTTCT 385234 Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117 |||||||| || | || ||||| || ||| || || ||||| || || || || || Sbjct 385235 GACACTATTGA-TAACGTGAAGGCGAAGATCCAAGATAAGGAAGGCATCCCTCCCGATCA 385293 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 || || |||| ||||| ||||| || | ||||| | |||||| || || || || Sbjct 385294 GCAACGTCTTATCTTTGCTGGCAAGCAGCTCGAAGACGGTCGCACCCTGTCTGACTATAA 385353 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 ||||| || || || || || ||| | || || Sbjct 385354 CATTCAGAAGGAGTCTACTCTCCATCTCGTCCT 385386 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433324715102930