Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq370 197 2e-45 >seq370 Length=376741 Score = 197 bits (218), Expect = 2e-45 Identities = 385/568 (68%), Gaps = 3/568 (1%) Strand=Plus/Minus Query 93081 TGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGC 93140 || ||| || ||| ||||| |||||||| | ||||| || || || | ||| || Sbjct 251838 TGAACAGTAGGCAGGCAAAATCGGTATGCATGCCTTCATCACGGCTGATGAGCTCGTTAG 251779 Query 93141 TGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTAC 93200 |||||| || || || | || || || ||||| | ||| || || || || ||| | Sbjct 251778 AGAATGTCAAGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGC 251719 Query 93201 CAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGG 93260 | || || || || || ||||| || || || || || | |||||||||||| | | Sbjct 251718 CGGAGAAGAAAATGCCCTCCACAGCAGCGAAGGCAACTAGACGTTCGGCAAAGGTAGACT 251659 Query 93261 AATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTT 93320 ||| | |||||| | | |||||| |||||||| ||||| || ||||| | || | Sbjct 251658 CTTTATCGGAGATCCAGGTGAGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGT 251599 Query 93321 CGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACA 93380 | | |||| || ||||| || |||| | | | || ||||| || ||||| | || Sbjct 251598 CAACGGCGTCGAAGAGGTATTCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAGCA 251539 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 | || || | || ||||||| |||||||| |||||||| || |||||||||| | Sbjct 251538 GGGAGTATGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAACCATAGAAACATCGTG 251479 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 | || | | ||| ||||| | || || | ||| ||||| || || ||||| ||||||| Sbjct 251478 CCTCAGCGGCCTGGACTTCATTGGAGAAGCGCTCCACGAGGTTCTCGTTGACGATACCAT 251419 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA--- 93557 | || || || || || || | | ||| || || || ||| | || |||| Sbjct 251418 CCGAGGCGGCGAAGAAGGCGAGGACATGTGAGATGAAGTGACGCTCGTTGTCGTTAAGGC 251359 Query 93558 GCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617 | || | ||| || || || || || || || | || ||| ||||||| || || | Sbjct 251358 GGTTGTTCCAGTCATGAAGGTCCTTGGAGAGGTCCATCTCCTCGGCAGTCCAGAAGGAGG 251299 Query 93618 CTTCTGCTTTTTTGTACATATCCCATAT 93645 |||| || || |||||||| | ||| || Sbjct 251298 CTTCAGCCTTCTTGTACATTTGCCAGAT 251271 Score = 183 bits (202), Expect = 3e-41 Identities = 381/565 (67%), Gaps = 8/565 (1%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| ||||| |||||||| | || ||||| || || | ||| ||| ||| || || Sbjct 249682 GCAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAA 249741 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 ||||| | || |||||| || | | |||||| || | |||||| || |||||||| Sbjct 249742 TCCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAA 249801 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTGCT 93270 || |||||||| ||||| || || |||| || || | ||| |||||| | | | Sbjct 249802 AATGCCTTCCACTGCTGCGAAAGCAACAAGCCGCTCCGAAAA---TGCGGATGTCTCGGT 249858 Query 93271 G---ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 |||||||| || ||||| || || |||| ||| ||| |||| | |||||||| || Sbjct 249859 AGAAATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGC 249918 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || || | || || ||||| | ||| ||||| || || |||| || ||||| Sbjct 249919 CCGGAAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATA 249978 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | || || || ||||| || || |||||| || || |||||||| | || |||| Sbjct 249979 CGCCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACAACGGGCCTCCGC 250038 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 ||||||||||| || || | || || || || || ||||| || ||||| || | Sbjct 250039 AATCTGCACTTCACTCGAGAAGCGTTCCACAAGGTTCTCGTTGACAATGCCATCCGAAGA 250098 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATCCCA 93567 ||||| || || | | || | || || || |||| | || || ||| Sbjct 250099 GGCAAAGAACGCGAGAACGCGCGAAAGGAAGTGGCGTTCCGGATCTGTCAGGTTCATCCA 250158 Query 93568 ATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGCTTT 93627 || | ||| | || | || | ||||||||||||||| ||||| || | ||| || Sbjct 250159 GTCCCAGGTATCATGCGATAAGTCAATTTCTTCGACAGTCCAGAACGAAGCCTGTGCCTT 250218 Query 93628 TTTGTACATATCCCATATGTCTTGA 93652 ||||| | | |||||| |||||| Sbjct 250219 CTTGTAAAGAGCCCATA--TCTTGA 250241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556856470407280