Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq378 102 2e-16 seq370 93.3 9e-14 >seq378 Length=400989 Score = 102 bits (112), Expect = 2e-16 Identities = 359/554 (65%), Gaps = 30/554 (5%) Strand=Plus/Minus Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404 |||||||| || || |||| | ||||||||||| ||||||| ||||| |||| ||| Sbjct 347095 GGTGAGGACCTTTGCAACTGCCAGTTCTCGCTCGCCTATGGTGCCAAGATCTTGCTCAAC 347036 Query 279405 TC---TACCCGCC-TCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGG 279460 | ||| | || || ||||||||||| | || || |||||| |||| || || Sbjct 347035 ACCGCTACTCTCCGTC----TCAAGCGTGGCCATCGTTACGGTCTCTGCGGTAAGAACGG 346980 Query 279461 AGCGGGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAA 279520 | || ||| || || ||||| ||||| | ||||| ||| | || || || || Sbjct 346979 TACCGGAAAGTCTACCCTCATGCGTGCCATCACCAACGGCCAGGTCGAGGGCTTCCCCTC 346920 Query 279521 CGCATCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTCCTCTCTCTCGGATAG 279580 | | |||||| | || | || || ||||||||||| || | | ||||| Sbjct 346919 CCCTGATGAGGTCCGCACCTTCTACGTCGAGCACGACATTGATGGCAGCGACGAGGATAT 346860 Query 279581 CACTGTGTTCGACT---TCCTAACGTCTGACAATCAGGTTATGGAAATCAGCTCTCCTGA 279637 ||| || || | | |||| |||||| | | || | | || || Sbjct 346859 CACCGTTCTCCAATGGGTCCTTGA---TGACAAGCGTATCCAGGCTACCCGC------GA 346809 Query 279638 GGAAATCATCCAGAAACTGGAGGCCAATGGTTT---TGATGAAAG--AATGCGTAATCTG 279692 ||| ||| || || || | ||| ||||| |||||| | || || || | Sbjct 346808 GGAGATCGTCGAGGCTCTCGCCGCCGTCGGTTTCAGTGATGATCGTCAA---GT--TCAG 346754 Query 279693 CCAGTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTA 279752 | | || || |||| |||||||||||||||||||| |||||| | || || || | Sbjct 346753 TCCATCGGCTCCTTGTCTGGTGGTTGGAAGATGAAGCTCGCCCTCGCCCGTGCTATGTTG 346694 Query 279753 CTGCGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTA 279812 | ||||| | | || || |||||||| || ||||| | ||| |||||| Sbjct 346693 TTCAAGGCCGACATTTTGCTTCTCGATGAGCCCACTAACCATCTTGACGTTGTCAACGTC 346634 Query 279813 GCCTGGCTAGTGTCCTACCTAACCAGTCTGAAGAATGTTTCTTCCCTCATTGTCTCTCAC 279872 || ||| | | | ||||||| ||| || | | ||||| |||||||||||||| Sbjct 346633 GCTTGGTTGGAGACCTACCTCACCTCCCTCACCCACTGCACTTCCATCATTGTCTCTCAC 346574 Query 279873 GACTCTGGCTTCCT 279886 |||||||| ||||| Sbjct 346573 GACTCTGGTTTCCT 346560 Score = 89.7 bits (98), Expect = 1e-12 Identities = 143/203 (70%), Gaps = 3/203 (1%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||| || || |||| | ||||||| |||| | || Sbjct 346264 GGTCCCAACGGTTCCGGCAAGTCGACTCTCGTCAAGCTGTTGACTGGTGAGATGGAACCC 346205 Query 280239 ACTGAGGG--GTCCGTT-TGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| || | | |||||||| |||||| || || | ||| || || |||||| Sbjct 346204 AACAAGGGTGGTGAGATCTGGAAGCACCCCAACTTGGTCATTGGTTATGTTGCCCAGCAC 346145 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| |||||||| |||| |||| | | | ||||| |||||| Sbjct 346144 GCCTTCCACCACATCGATAACCACCTTGACAAGACTGCCCTCGAGTACATGTTGTGGCGT 346085 Query 280356 TATGCAAGTGGGCAGGATCTGGA 280378 || | ||| ||||| |||| Sbjct 346084 TACCAGACTGGTGAGGATTTGGA 346062 >seq370 Length=376741 Score = 93.3 bits (102), Expect = 9e-14 Identities = 123/171 (72%), Gaps = 0/171 (0%) Strand=Plus/Minus Query 251544 ATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCAT 251603 ||| ||||| || || ||| ||||| |||| |||||||| || || || | ||||| Sbjct 252169 ATAATCAGAGACTCGCTTTTCAAAGAAGTTAGTCTTGCCCTGCAATGAAATCATATCCAT 252110 Query 251604 GAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCG 251663 ||||||||| ||||| | ||||| || || |||||| | |||| | || Sbjct 252109 GAAGTCGAAAGGGTTCGACTTGTTGTAGACTTTCTCATTGCCAAGAGAGACGAGCAGTCG 252050 Query 251664 GTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 ||| || |||||||| | ||| || | ||||| || |||||||||||||| Sbjct 252049 GTCAGCAACAAACTCAATATATTGGCACATCAAATCGGAGTTCATGCCAAT 251999 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027828608783102