Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_008724.1
Length=288047
Score E
Sequences producing significant alignments: (Bits) Value
seq345 196 9e-45
seq433 192 1e-43
seq298 163 5e-35
seq378 141 2e-28
seq353 89.7 9e-13
>seq345
Length=266695
Score = 196 bits (216), Expect = 9e-45
Identities = 352/512 (69%), Gaps = 2/512 (0%)
Strand=Plus/Minus
Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343
|||| |||||||| ||| || |||| || || || ||| || ||||||| ||
Sbjct 141267 CATGTCCCCAATCTCGCAACGCATCCAAATTTCCAAGATACAAACACGACTGCTTGTTGA 141208
Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403
|||| | |||| | | | || || || | ||||| |||||| || || |
Sbjct 141207 GCTTGATATCAGCAACAGCCCTCGTAATCTTCCTCGTCACAAACGTCCGTCCGCGCCTTG 141148
Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463
| ||||||||||| || | ||| || || || || ||||| ||||| ||| | ||| |
Sbjct 141147 GACTCTCGTGGTTAAACAAGATCCCATTACATGCAAACATCCCATAACTCTCCCTGTAAT 141088
Query 268464 TCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGG 268523
||||| ||||||| || | | |||||| |||| || || ||||||| ||| |
Sbjct 141087 TCACGCAAATCCAGTAGGCGTAGAGCTTTGCGCAGCCGTAGGGCGAGCGTGGATAGAACG 141028
Query 268524 GCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTT 268583
||||||| | || || | || ||| |||||| ||||||||||||| || ||||
Sbjct 141027 GCGTCGTCTCGCTCTGTGGCGTCTCGACGACCTTGCCATAGAGCTCGGAGGTGGAGGCTT 140968
Query 268584 GGTAGAACTTTGTTGTTTTT-TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642
||||||| | || || ||||| |||||| | ||||| || ||||| | || ||
Sbjct 140967 GGTAGAAGCG-GACGTGCTTCTCGAGGCCGCAGGTGCGGATGGCGTCGAGGAGGCGGAGT 140909
Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702
|| || | || || ||||| | || ||||| | ||||||||| || |||| ||| |||
Sbjct 140908 GTGCCGAGCCCGTCGACGTCGCCAGTGTACTCGGCCATCTCGAAGGAGACCTTGACGTGG 140849
Query 268703 CTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGG 268762
||||||||| ||||| || || || || | |||||| | ||| | ||| |||
Sbjct 140848 GACTGGGCGCCGAGGTTGTAGACTTCGGTTGGCTGGACCTGGGCAATGATGTACACCAGG 140789
Query 268763 TTCGTTGAGTCGGTGAGGTCTCCGTAGTGCAA 268794
||||| || | || || |||||||||||
Sbjct 140788 TTCGTGCTATCACTTAGATCGCCGTAGTGCAA 140757
>seq433
Length=1580550
Score = 192 bits (212), Expect = 1e-43
Identities = 181/228 (79%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293
|| || || ||||| || | |||| || || || |||||||| |||||||| || || ||
Sbjct 1108752 CCGCCACGGAGGCG-AAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGA 1108694
Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353
||| || | |||||| |||| |||||| || ||||| || || | ||||||||| || ||
Sbjct 1108693 GAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGG 1108634
Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413
||||| |||||||| |||||||| |||||||| || |||||||| | ||| || ||
Sbjct 1108633 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCAC 1108574
Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||||| |||||||| || ||||| || ||||||||||| ||||||||
Sbjct 1108573 CTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526
Score = 174 bits (192), Expect = 3e-38
Identities = 179/234 (76%), Gaps = 0/234 (0%)
Strand=Plus/Minus
Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287
|||||| || || || || || | || | ||| || |||||||| || || ||||| ||
Sbjct 1108987 TTAATTACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTA 1108928
Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347
||| ||||| || | |||||||| | ||| || |||||||| || || | ||||| ||
Sbjct 1108927 ATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATC 1108868
Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407
|| ||||| |||||||| ||||||||||| ||||| || || || ||||| | ||
Sbjct 1108867 AGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGA 1108808
Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
||| || || | |||||||| || || ||||||||||||||||| ||||||||
Sbjct 1108807 TTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754
Score = 170 bits (188), Expect = 4e-37
Identities = 160/204 (78%), Gaps = 0/204 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || || || || || || ||||||||||||||||| || | ||||| || | |||
Sbjct 1108500 TGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCGAGTTGC 1108441
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| ||||| || ||||| | ||||||||| || || |||||||||||||| || |||||
Sbjct 1108440 TTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTG 1108381
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| || ||||||||||| | ||| || || || | |||||||| || || |||
Sbjct 1108380 GCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTG 1108321
Query 68439 AGGGTCTTGACGAATATCTGCATT 68462
|||||||||||||| || ||||||
Sbjct 1108320 AGGGTCTTGACGAAGATTTGCATT 1108297
Score = 165 bits (182), Expect = 2e-35
Identities = 174/229 (76%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292
|||| || || || || | || | ||| || || ||||| || ||||| || || || |
Sbjct 1108298 TTCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAG 1108239
Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352
| || || | |||||| || | |||||| || ||||| || || | ||| |||||||| |
Sbjct 1108238 ACAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAG 1108179
Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412
| ||||| |||||||| || ||||| || |||||| |||||||| || | || || |
Sbjct 1108178 GGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGA 1108119
Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|||| | || ||||| || |||||||||||||||||||| ||||||||
Sbjct 1108118 CTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070
Score = 89.7 bits (98), Expect = 9e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417
|| ||||||||||| ||||| ||||||||| ||||||||||| | || || || ||
Sbjct 1107890 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCG 1107831
Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| |||||| || || || ||||| ||||| ||||| || |||||
Sbjct 1107830 AGGGTGATAGTCTTGCCGGTGAGAGTCTTTACGAAGATTTGCAT 1107787
>seq298
Length=714934
Score = 163 bits (180), Expect = 5e-35
Identities = 161/208 (77%), Gaps = 0/208 (0%)
Strand=Plus/Minus
Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313
||||||| || ||| ||| || || ||||| ||||| || || || | ||||||||| |
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373
||||| || || || || || | ||||||||||| ||||| || |||||||| ||||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719
Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433
|||| || ||||| || |||||||| | ||| || ||||||| ||||||||| || |
Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659
Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461
| || |||||||| ||||| || |||||
Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631
Score = 158 bits (174), Expect = 2e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294
||||||||||| || | || | || || || ||||| || || |||||||| || ||
Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342
Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354
|| || | || ||||| | |||||| || || || || || | ||| || ||||| ||
Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282
Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414
||||||||||| ||||| ||||| ||||| ||| || || ||||| | ||||| ||
Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222
Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
|| | |||||| || || || |||||||||||||| || ||||||||
Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175
Score = 145 bits (160), Expect = 1e-29
Identities = 154/203 (76%), Gaps = 0/203 (0%)
Strand=Plus/Minus
Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318
|| || || ||||| || || ||||| || |||||||| || | || || || | ||||
Sbjct 385605 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGC 385546
Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378
|| || ||||| ||||| | ||||| ||||| ||||||||||||||||| ||||||||
Sbjct 385545 TTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTC 385486
Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438
||||| ||| || |||||||| | || || || || | |||||| || || || ||
Sbjct 385485 GCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTA 385426
Query 68439 AGGGTCTTGACGAATATCTGCAT 68461
|| ||||| || || || |||||
Sbjct 385425 AGAGTCTTCACAAAGATTTGCAT 385403
>seq378
Length=400989
Score = 141 bits (156), Expect = 2e-28
Identities = 669/1041 (64%), Gaps = 44/1041 (4%)
Strand=Plus/Plus
Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037
|| |||||| ||||||| | || ||| |||| |||||||| || || ||||||||
Sbjct 346083 TAACGCCACAACATGTACTCGAGGGCAGTCTTGTCAAGGTGGTTATCGATGTGGTGGAAG 346142
Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA---CAGAGCCCCGA 225094
|| |||||||| || || | ||| || |||||| |||||||| | || |||
Sbjct 346143 GCGTGCTGGGCAACATAACCAATGACCAAGTTGGGGTGCTTCCAGATCTCACCACCCTTG 346202
Query 225095 GTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154
| |||| ||| || || | | ||||| ||| || | |||||| | ||| |||||
Sbjct 346203 TTGGGTTCCATCTCACCAGTCAACAGCTTGACGAGAGTCGACTTGCCGGAACCGTTGGGA 346262
Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCT-- 225212
|| | | | ||| || || |||| | ||| || | | | || | || ||
Sbjct 346263 CCGAGGATGGCAACACGAGAAGACAAGGAAACTTGGAGGGTGATGTCGTACAACTGCTGC 346322
Query 225213 -CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271
||||| | || |||| |||| ||| |||| ||| | | | |||||
Sbjct 346323 ACAGGGGCGGTGGGGTATTGGAAGGACACCTTGCGCATCTTGAGCAAAGACTTCTCCTTT 346382
Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTG--GTCACCG-CGTCC 225328
| | | ||| || |||| || ||||||| || ||||| ||| || || ||
Sbjct 346383 GTCTTGACACCTTCGAGGAGAGGAGGGTCGGGGAGCTTGAACTTGTAGTCCTCGGCGGCC 346442
Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTC-GGGTCG-CTTTGCCACGAAAGCAGACAGGTTTC 225386
| ||| ||||||||| ||||| ||| || | ||| ||||| || ||||| |
Sbjct 346443 TCGAGGGTGTAGTAAGACTTGGCCTCAGGGACGGCCTTG--ACGAAGGCCTCGAGGTTAC 346500
Query 225387 CGAGGT-GCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGC- 225444
| || || || |||||||| | || || | || | || | ||
Sbjct 346501 CCCTGTAGCGACG-GAGCTTGAAGCGGTTGAGGTGGAGGAC----GTCGGTGATGGTGTT 346555
Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504
|| ||||| ||||||||||| || ||||||||||| | || || ||| ||||
Sbjct 346556 GTTGAGGAAACCAGAGTCGTGAGAGACAATGATGGAAGTGCAGTGGGTGAGGGAGGTGAG 346615
Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564
|| || | ||| || |||||| ||||| | ||||| || || || || |||||
Sbjct 346616 GTAGGTCTCCAACCAAGCGACGTTGACAACGTCAAGATGGTTAGTGGGCTCATCGAGAAG 346675
Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624
|| ||||| || | | | || || || | ||| | |||||||| ||||| || ||
Sbjct 346676 CAAAATGTCGGCCTTGAACAACATAGCACGGGCGAGGGCGAGCTTCATCTTCCAACCACC 346735
Query 225625 GGACAGGGAGCCGATTGAAACAGAGTGCTTAGCT-TCGTCA---AAGCCGTACTCCAG-G 225679
|||| ||||||||| || | || ||| | || ||| || ||| || | | |
Sbjct 346736 AGACAAGGAGCCGATGGA--CTGAA--CTTGACGATCATCACTGAAACCG-ACGGCGGCG 346790
Query 225680 AGCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGCGGCAACGTTGGGGTC--GGACG-A 225735
|| | || || || |||| | | ||| || || ||| || |||| |
Sbjct 346791 AGAGCCTCGACGATCTCCTCGCGGGTAGCCTGGATACGC----TTGTCATCAAGGACCCA 346846
Query 225736 GAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACAC 225795
|| | ||||| || ||| | | | ||||||||||| || ||||| |
Sbjct 346847 TTGGAGA------ACGGTGATATCCTCGTCGCTGCCATCAATGTCGTGCTCGACGTAGAA 346900
Query 225796 CGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAG 225855
|| |||| || | || |||||||||||| | |||||| || | || ||||| |
Sbjct 346901 GGTGCGGACCTCATCAGGGGAGGGGAAGCCCTCGACCTGGCCGTTGGTGATGGCACGCAT 346960
Query 225856 CAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGAT 225915
|||||| ||| || | ||||| |||| ||| |||||| ||| || |||||||
Sbjct 346961 GAGGGTAGACTTTCCGGTACCGTTCTTACCGCAGAGACCGTAACGATGGCCACGCTTGAG 347020
Query 225916 GTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATC 225975
||| | || ||| || | ||||||| |||||||||| || ||||||| ||| |
Sbjct 347021 ACGGAGAGTAGCGGTGTTGAGCAAGATCTTGGCACCATAGGCGAGCGAGAACTGGCAGTT 347080
Query 225976 GCACAGGTCCTCACCCTCCTC 225996
||| |||||||||||||||||
Sbjct 347081 GCAAAGGTCCTCACCCTCCTC 347101
>seq353
Length=244416
Score = 89.7 bits (98), Expect = 9e-13
Identities = 82/104 (79%), Gaps = 0/104 (0%)
Strand=Plus/Minus
Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417
||||||||||| || || || |||||||| || |||||||| | || || || ||
Sbjct 157004 CCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCG 156945
Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461
| ||||||||| || || || |||||||||||||| ||||||||
Sbjct 156944 AGGGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 156901
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 921615234385840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |