Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq345 196 9e-45 seq433 192 1e-43 seq298 163 5e-35 seq378 141 2e-28 seq353 89.7 9e-13 >seq345 Length=266695 Score = 196 bits (216), Expect = 9e-45 Identities = 352/512 (69%), Gaps = 2/512 (0%) Strand=Plus/Minus Query 268284 CATGGCCCCAATCGCGCTTTGCGTCCATGTTCCCGAGGAACAGGCATTTCTGCTTGCCGA 268343 |||| |||||||| ||| || |||| || || || ||| || ||||||| || Sbjct 141267 CATGTCCCCAATCTCGCAACGCATCCAAATTTCCAAGATACAAACACGACTGCTTGTTGA 141208 Query 268344 GCTTCACGCGTGCAAGACCGCGAGTGATTTTTCGGGTCACGAACGTCTCGCCACGTAGAG 268403 |||| | |||| | | | || || || | ||||| |||||| || || | Sbjct 141207 GCTTGATATCAGCAACAGCCCTCGTAATCTTCCTCGTCACAAACGTCCGTCCGCGCCTTG 141148 Query 268404 GGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAGT 268463 | ||||||||||| || | ||| || || || || ||||| ||||| ||| | ||| | Sbjct 141147 GACTCTCGTGGTTAAACAAGATCCCATTACATGCAAACATCCCATAACTCTCCCTGTAAT 141088 Query 268464 TCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAGG 268523 ||||| ||||||| || | | |||||| |||| || || ||||||| ||| | Sbjct 141087 TCACGCAAATCCAGTAGGCGTAGAGCTTTGCGCAGCCGTAGGGCGAGCGTGGATAGAACG 141028 Query 268524 GCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCTT 268583 ||||||| | || || | || ||| |||||| ||||||||||||| || |||| Sbjct 141027 GCGTCGTCTCGCTCTGTGGCGTCTCGACGACCTTGCCATAGAGCTCGGAGGTGGAGGCTT 140968 Query 268584 GGTAGAACTTTGTTGTTTTT-TCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642 ||||||| | || || ||||| |||||| | ||||| || ||||| | || || Sbjct 140967 GGTAGAAGCG-GACGTGCTTCTCGAGGCCGCAGGTGCGGATGGCGTCGAGGAGGCGGAGT 140909 Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702 || || | || || ||||| | || ||||| | ||||||||| || |||| ||| ||| Sbjct 140908 GTGCCGAGCCCGTCGACGTCGCCAGTGTACTCGGCCATCTCGAAGGAGACCTTGACGTGG 140849 Query 268703 CTCTGGGCGCCCAGGTTATAAACCTCATCCGGTTTGACCTGCTGCACGATCTTCACGAGG 268762 ||||||||| ||||| || || || || | |||||| | ||| | ||| ||| Sbjct 140848 GACTGGGCGCCGAGGTTGTAGACTTCGGTTGGCTGGACCTGGGCAATGATGTACACCAGG 140789 Query 268763 TTCGTTGAGTCGGTGAGGTCTCCGTAGTGCAA 268794 ||||| || | || || ||||||||||| Sbjct 140788 TTCGTGCTATCACTTAGATCGCCGTAGTGCAA 140757 >seq433 Length=1580550 Score = 192 bits (212), Expect = 1e-43 Identities = 181/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAG-TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGA 68293 || || || ||||| || | |||| || || || |||||||| |||||||| || || || Sbjct 1108752 CCGCCACGGAGGCG-AAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGA 1108694 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | |||||| |||| |||||| || ||||| || || | ||||||||| || || Sbjct 1108693 GAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGG 1108634 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||| |||||||| |||||||| |||||||| || |||||||| | ||| || || Sbjct 1108633 GATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCAC 1108574 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||||| |||||||| || ||||| || ||||||||||| |||||||| Sbjct 1108573 CTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Score = 174 bits (192), Expect = 3e-38 Identities = 179/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 68228 TTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATA 68287 |||||| || || || || || | || | ||| || |||||||| || || ||||| || Sbjct 1108987 TTAATTACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTA 1108928 Query 68288 ATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTC 68347 ||| ||||| || | |||||||| | ||| || |||||||| || || | ||||| || Sbjct 1108927 ATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATC 1108868 Query 68348 GGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGA 68407 || ||||| |||||||| ||||||||||| ||||| || || || ||||| | || Sbjct 1108867 AGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGA 1108808 Query 68408 TTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || | |||||||| || || ||||||||||||||||| |||||||| Sbjct 1108807 TTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 170 bits (188), Expect = 4e-37 Identities = 160/204 (78%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || || || || || ||||||||||||||||| || | ||||| || | ||| Sbjct 1108500 TGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTCGAGTTGC 1108441 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || ||||| || ||||| | ||||||||| || || |||||||||||||| || ||||| Sbjct 1108440 TTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTGGATCTTG 1108381 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| || ||||||||||| | ||| || || || | |||||||| || || ||| Sbjct 1108380 GCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTTGCCAGTG 1108321 Query 68439 AGGGTCTTGACGAATATCTGCATT 68462 |||||||||||||| || |||||| Sbjct 1108320 AGGGTCTTGACGAAGATTTGCATT 1108297 Score = 165 bits (182), Expect = 2e-35 Identities = 174/229 (76%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 |||| || || || || | || | ||| || || ||||| || ||||| || || || | Sbjct 1108298 TTCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAG 1108239 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | |||||| || | |||||| || ||||| || || | ||| |||||||| | Sbjct 1108238 ACAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAG 1108179 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | ||||| |||||||| || ||||| || |||||| |||||||| || | || || | Sbjct 1108178 GGATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGA 1108119 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| | || ||||| || |||||||||||||||||||| |||||||| Sbjct 1108118 CTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 || ||||||||||| ||||| ||||||||| ||||||||||| | || || || || Sbjct 1107890 CCCTCCTTGTCTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCGGAAGACTCAACCTCG 1107831 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||| || || || ||||| ||||| ||||| || ||||| Sbjct 1107830 AGGGTGATAGTCTTGCCGGTGAGAGTCTTTACGAAGATTTGCAT 1107787 >seq298 Length=714934 Score = 163 bits (180), Expect = 5e-35 Identities = 161/208 (77%), Gaps = 0/208 (0%) Strand=Plus/Minus Query 68254 CCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTA 68313 ||||||| || ||| ||| || || ||||| ||||| || || || | ||||||||| | Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 68314 ACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAA 68373 ||||| || || || || || | ||||||||||| ||||| || |||||||| |||| Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 68374 TCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTC 68433 |||| || ||||| || |||||||| | ||| || ||||||| ||||||||| || | Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659 Query 68434 CCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || |||||||| ||||| || ||||| Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCAT 385631 Score = 158 bits (174), Expect = 2e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||||||||| || | || | || || || ||||| || || |||||||| || || Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | |||||| || || || || || | ||| || ||||| || Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 ||||||||||| ||||| ||||| ||||| ||| || || ||||| | ||||| || Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || |||||||||||||| || |||||||| Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 Score = 145 bits (160), Expect = 1e-29 Identities = 154/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 68259 TGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGC 68318 || || || ||||| || || ||||| || |||||||| || | || || || | |||| Sbjct 385605 TGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGC 385546 Query 68319 TTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTT 68378 || || ||||| ||||| | ||||| ||||| ||||||||||||||||| |||||||| Sbjct 385545 TTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTC 385486 Query 68379 GCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTG 68438 ||||| ||| || |||||||| | || || || || | |||||| || || || || Sbjct 385485 GCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTA 385426 Query 68439 AGGGTCTTGACGAATATCTGCAT 68461 || ||||| || || || ||||| Sbjct 385425 AGAGTCTTCACAAAGATTTGCAT 385403 >seq378 Length=400989 Score = 141 bits (156), Expect = 2e-28 Identities = 669/1041 (64%), Gaps = 44/1041 (4%) Strand=Plus/Plus Query 224978 TACCGCCACTGGATGTACTGGTTGGGGGTCATGTCCAGGTGGTTCTCAATATGGTGGAAA 225037 || |||||| ||||||| | || ||| |||| |||||||| || || |||||||| Sbjct 346083 TAACGCCACAACATGTACTCGAGGGCAGTCTTGTCAAGGTGGTTATCGATGTGGTGGAAG 346142 Query 225038 GCATGCTGGGCTACGTACGCCATGCGCATGTTGGGATGCTTCCACA---CAGAGCCCCGA 225094 || |||||||| || || | ||| || |||||| |||||||| | || ||| Sbjct 346143 GCGTGCTGGGCAACATAACCAATGACCAAGTTGGGGTGCTTCCAGATCTCACCACCCTTG 346202 Query 225095 GTCGGTTGTGCCTCGCCGGTGAGGACCTTGATGAGCGTAGTCTTGCCCGCACCATTGGGG 225154 | |||| ||| || || | | ||||| ||| || | |||||| | ||| ||||| Sbjct 346203 TTGGGTTCCATCTCACCAGTCAACAGCTTGACGAGAGTCGACTTGCCGGAACCGTTGGGA 346262 Query 225155 CCAATCACGCCAATCCGGGATGACATTGCAACCTGCGAGTTCACGTTGCTGAAGATCT-- 225212 || | | | ||| || || |||| | ||| || | | | || | || || Sbjct 346263 CCGAGGATGGCAACACGAGAAGACAAGGAAACTTGGAGGGTGATGTCGTACAACTGCTGC 346322 Query 225213 -CAGGGCCAGTTTGGTAAGCAAAGGCCACGCCACGCAGCTTCATGATGGCACGGTCCTTG 225271 ||||| | || |||| |||| ||| |||| ||| | | | ||||| Sbjct 346323 ACAGGGGCGGTGGGGTATTGGAAGGACACCTTGCGCATCTTGAGCAAAGACTTCTCCTTT 346382 Query 225272 GAAGTAATACCCTCCAGGAACCCGGGCTCGGGGAACTCCCACTTG--GTCACCG-CGTCC 225328 | | | ||| || |||| || ||||||| || ||||| ||| || || || Sbjct 346383 GTCTTGACACCTTCGAGGAGAGGAGGGTCGGGGAGCTTGAACTTGTAGTCCTCGGCGGCC 346442 Query 225329 TTCAGGTCGTAGTAAGATGCAGCCTC-GGGTCG-CTTTGCCACGAAAGCAGACAGGTTTC 225386 | ||| ||||||||| ||||| ||| || | ||| ||||| || ||||| | Sbjct 346443 TCGAGGGTGTAGTAAGACTTGGCCTCAGGGACGGCCTTG--ACGAAGGCCTCGAGGTTAC 346500 Query 225387 CGAGGT-GCTTCGTGAGCTTGAGGTTCTTCTCGTAATGAACAATTGCCGAGCACACTGC- 225444 | || || || |||||||| | || || | || | || | || Sbjct 346501 CCCTGTAGCGACG-GAGCTTGAAGCGGTTGAGGTGGAGGAC----GTCGGTGATGGTGTT 346555 Query 225445 GTCAAGGAAGCCAGAGTCGTGGGACACAATGATGGACGACACGTTCGTCAGGCCCTTGAG 225504 || ||||| ||||||||||| || ||||||||||| | || || ||| |||| Sbjct 346556 GTTGAGGAAACCAGAGTCGTGAGAGACAATGATGGAAGTGCAGTGGGTGAGGGAGGTGAG 346615 Query 225505 GTGCGTGATGAGCCATGCCACGTTGCTGACGTCCATGTGGTTTGTAGGTTCGTCCAGAAG 225564 || || | ||| || |||||| ||||| | ||||| || || || || ||||| Sbjct 346616 GTAGGTCTCCAACCAAGCGACGTTGACAACGTCAAGATGGTTAGTGGGCTCATCGAGAAG 346675 Query 225565 CAGGATGTCAGCATCAATGAGGATGGCGCGCGTGAGAGACAGCTTCATTTTCCAGCCCCC 225624 || ||||| || | | | || || || | ||| | |||||||| ||||| || || Sbjct 346676 CAAAATGTCGGCCTTGAACAACATAGCACGGGCGAGGGCGAGCTTCATCTTCCAACCACC 346735 Query 225625 GGACAGGGAGCCGATTGAAACAGAGTGCTTAGCT-TCGTCA---AAGCCGTACTCCAG-G 225679 |||| ||||||||| || | || ||| | || ||| || ||| || | | | Sbjct 346736 AGACAAGGAGCCGATGGA--CTGAA--CTTGACGATCATCACTGAAACCG-ACGGCGGCG 346790 Query 225680 AGCGTCTGGATAATGCGCTCGGGAG-AGCTGCGAGCGGCAACGTTGGGGTC--GGACG-A 225735 || | || || || |||| | | ||| || || ||| || |||| | Sbjct 346791 AGAGCCTCGACGATCTCCTCGCGGGTAGCCTGGATACGC----TTGTCATCAAGGACCCA 346846 Query 225736 GAGGTAATCATATACGGTCATGTCCGAGACAGACGCGTCAATGTCGTGGTCCACGTACAC 225795 || | ||||| || ||| | | | ||||||||||| || ||||| | Sbjct 346847 TTGGAGA------ACGGTGATATCCTCGTCGCTGCCATCAATGTCGTGCTCGACGTAGAA 346900 Query 225796 CGTCCGGAGCTGAGAAGCATCGGGGAAGCCCTCCAGCTGGCCATTTGCAATCGCACGGAG 225855 || |||| || | || |||||||||||| | |||||| || | || ||||| | Sbjct 346901 GGTGCGGACCTCATCAGGGGAGGGGAAGCCCTCGACCTGGCCGTTGGTGATGGCACGCAT 346960 Query 225856 CAGGGTACTCTTGCCCGCGCCGTTGGGACCGATGAGGCCGTAATGATTCCCGCGCTTGAT 225915 |||||| ||| || | ||||| |||| ||| |||||| ||| || ||||||| Sbjct 346961 GAGGGTAGACTTTCCGGTACCGTTCTTACCGCAGAGACCGTAACGATGGCCACGCTTGAG 347020 Query 225916 GTTGAGGCGCGTGGAGTTCAGGAGGATCTTGCCACCATAGGCAAGGGAGAACTCGCAATC 225975 ||| | || ||| || | ||||||| |||||||||| || ||||||| ||| | Sbjct 347021 ACGGAGAGTAGCGGTGTTGAGCAAGATCTTGGCACCATAGGCGAGCGAGAACTGGCAGTT 347080 Query 225976 GCACAGGTCCTCACCCTCCTC 225996 ||| ||||||||||||||||| Sbjct 347081 GCAAAGGTCCTCACCCTCCTC 347101 >seq353 Length=244416 Score = 89.7 bits (98), Expect = 9e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCC 68417 ||||||||||| || || || |||||||| || |||||||| | || || || || Sbjct 157004 CCTTCCTTGTCCTGGATTTTGGCCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCG 156945 Query 68418 AAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | ||||||||| || || || |||||||||||||| |||||||| Sbjct 156944 AGGGTGATGGTCTTCCCTGTAAGGGTCTTGACGAAGATCTGCAT 156901 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921615234385840