Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq298 122 7e-23 seq433 116 3e-21 >seq298 Length=714934 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||| ||||| || | | || | ||| | ||||| || || ||||||||||| ||| Sbjct 385632 ATACCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCG 385573 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || ||| || || || || || |||||| |||||||||||||||| || || Sbjct 385572 GAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGG 385513 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||| ||||| |||||| || | | |||| |||||| | || ||| Sbjct 385512 GGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCG 385453 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || | ||| | || ||||| || ||||| || ||||| || ||||| Sbjct 385452 ACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 Score = 111 bits (122), Expect = 1e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251 || || |||||||||||||| | ||| || |||||| ||||| || ||||| || Sbjct 385821 TCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCAGCAAAG 385762 Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311 || || ||||||||||| || ||||| || || ||||| |||||| ||| | | Sbjct 385761 ATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTTCGCTTTGACATTG 385702 Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371 |||| |||||| | || ||||| |||| ||| | || |||||||| || || || || Sbjct 385701 TCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTCACG 385642 Query 114372 AAAATCTGCAT 114382 || || ||||| Sbjct 385641 AAGATTTGCAT 385631 >seq433 Length=1580550 Score = 116 bits (128), Expect = 3e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 114151 AAATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAAT 114210 || |||| ||||| || | | ||| | || | || || || || ||||||||||||| Sbjct 1108985 AATTACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAAT 1108926 Query 114211 CGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCG 114270 | | |||||| ||||||||| ||||| || ||| |||| ||||||||||| || | Sbjct 1108925 CAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAG 1108866 Query 114271 GAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATT 114330 | ||||| ||||| || || |||||| || | | |||| ||||||| |||| Sbjct 1108865 GGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATT 1108806 Query 114331 CGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || | || ||||| || || || || || || |||||||| Sbjct 1108805 CGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 ||||||||||| || | | ||| | ||| | ||||| ||||| || |||||||| || Sbjct 1108755 ATACCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCA 1108696 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 | || || ||| || || || || |||||| |||| ||||| |||||||| ||| Sbjct 1108695 GAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGA 1108636 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || ||||| || ||||| |||||| || | | |||| |||||||| || || Sbjct 1108635 GGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCC 1108576 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || |||| || | || ||||| || || || || || || ||||||||| Sbjct 1108575 ACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCATG 1108525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420131215118664