Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq298 143 6e-29 seq433 140 8e-28 >seq298 Length=714934 Score = 143 bits (158), Expect = 6e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || ||||| || | || |||||||| | || || || || || |||||||| | Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| |||||||| | || || || || ||||| ||||| || ||| ||| Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| ||||| ||||| |||||||| || |||| || ||||| || Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || || ||||||||||||||||| || |||||||| || |||||||| Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 Score = 132 bits (146), Expect = 1e-25 Identities = 168/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | || |||||||| | || || || || || || ||||||| | Sbjct 385629 CCACCACGGAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAG 385570 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| ||||| || | || || || |||||||| ||||||||||| ||| ||| Sbjct 385569 AGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTG---ATCGGGG 385513 Query 288367 ---ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCT 288423 || ||||| || ||||| || ||||| || ||||| || || | || ||| || Sbjct 385512 GGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCG 385453 Query 288424 ACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| ||||| ||||| || || |||||||| || || || ||||| Sbjct 385452 ACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 >seq433 Length=1580550 Score = 140 bits (154), Expect = 8e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 ||||| ||||| | ||| || || || | ||| || || || || || || || | | Sbjct 1108980 CCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 1108921 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 ||||| || || ||||| | ||||| || |||||||| |||||||||||| | || Sbjct 1108920 AGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGA 1108861 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || ||||| ||||| || || || || ||||| || || || | ||| ||||| || Sbjct 1108860 ATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACC 1108801 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 ||||| ||||| ||||| || || || ||||||||||| |||||||| Sbjct 1108800 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 138 bits (152), Expect = 3e-27 Identities = 171/233 (73%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| ||||| ||||| | ||| |||||||||| || ||| || || || ||||| | Sbjct 1108528 CATG-CCACCACGGAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAAT 1108470 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 ||| ||| || || || || || | ||| || || || || || ||||| ||||| | Sbjct 1108469 CGGAGAGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAG 1108410 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 ||||| ||||| || |||||||| || || ||||| || || || | ||| || | Sbjct 1108409 GAGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACT 1108350 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 | || ||||| ||||| ||||| || || || ||||||||||| || |||||| Sbjct 1108349 CGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297 Score = 132 bits (146), Expect = 1e-25 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 |||||| || || | || || || |||| || || || |||||||| ||||| | Sbjct 1108297 TCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGA 1108238 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || ||||| || || || | || ||||| |||||||||||||| || || || Sbjct 1108237 CAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGG 1108178 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||| || || || |||||||| || ||||| ||||| || || | |||| || || || Sbjct 1108177 GATGCCCTCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGAC 1108118 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 |||||| || || ||||| || || || ||||||||||| |||||||| Sbjct 1108117 TTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 131 bits (144), Expect = 4e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | ||| || ||||| | || ||||| ||||| || ||||| | | Sbjct 1108752 CCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAG 1108693 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || |||| || ||||| |||||||||||||| ||||| | ||| Sbjct 1108692 AGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGG 1108633 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 || || || || ||||| || || || || || || || || | ||| || || || Sbjct 1108632 ATGCCCTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACC 1108573 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | |||||| ||||| || || || ||||||||||| |||||||| Sbjct 1108572 TCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179644998891716