Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq298 114 1e-20 seq433 109 5e-19 >seq298 Length=714934 Score = 114 bits (126), Expect = 1e-20 Identities = 145/196 (74%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||||||||||||| | || || ||||||||| || || || | Sbjct 385596 GACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCG 385537 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA- 138539 |||| ||||||||||| || || || || ||||| ||||| ||| | || | |||| Sbjct 385536 AAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTC-CTGAATCTTCGCCTTAAC 385478 Query 138540 -TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTT 138598 ||| || | |||||| | |||||| ||||||| || | || || ||||| ||||| | Sbjct 385477 GTTG-TCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCT 385419 Query 138599 TTACAAAAATCTGCAT 138614 | ||||| || ||||| Sbjct 385418 TCACAAAGATTTGCAT 385403 Score = 84.2 bits (92), Expect = 2e-11 Identities = 137/194 (71%), Gaps = 4/194 (2%) Strand=Plus/Minus Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482 |||||| ||||||||||| || | ||| ||| || |||||||| || || | | | Sbjct 385822 CTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCAGCAAA 385763 Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTT--AAT 138540 ||| || ||||||||||| || || ||||| || ||||| ||| | || | ||| || Sbjct 385762 GATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTC-CTGAATCTTCGCTTTGACAT 385704 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 || || | |||||| | ||||| || || | || | || || || || || || || Sbjct 385703 TG-TCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGTAAGGGTCTTC 385645 Query 138601 ACAAAAATCTGCAT 138614 || || || ||||| Sbjct 385644 ACGAAGATTTGCAT 385631 >seq433 Length=1580550 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138387 GCCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCT 138446 ||| || || | ||| | ||| | ||| | | | || ||||| |||||||| || ||| Sbjct 1108525 GCCACCACGGAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGA 1108466 Query 138447 CATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGG 138506 | ||||| ||||||||||| || |||| | | || ||||| |||||||| ||||| Sbjct 1108465 GAGGGTACGACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGG 1108406 Query 138507 TATACCTTCTTTGTCGGTGATTTTTTGTTTTA-ATTGTTCCACGGTGTCGGTCGACTCCA 138565 || ||||| ||||| ||| || || | |||| || | |||||||| ||||| | Sbjct 1108405 GATGCCTTCCTTGTCCTGGATCTTGGCCTTCACATTG-TCGATGGTGTCGGATGACTCGA 1108347 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || || || || || || ||||| Sbjct 1108346 CCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 1108298 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || || || | ||| | ||| | || | | | |||||||| ||||||||||| || Sbjct 1108980 CCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAG 1108921 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||||| || || || ||||| |||| |||| ||||||||||| || || || Sbjct 1108920 AGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGA 1108861 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG--TTTTAATTGTTCCACGGTGTCGGTCGACTCCA 138565 |||||||| || || ||| | || | || |||| || | ||||||| || || | Sbjct 1108860 ATACCTTCCTTATC-TTGAATCTTAGCCTTCACATTG-TCAATTGTGTCGGAAGATTCGA 1108803 Query 138566 CCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 |||||| || | || || ||||| || || || || || |||||||| Sbjct 1108802 CCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 86.0 bits (94), Expect = 6e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | || | ||| | ||| | | ||||| || || ||||||||||| Sbjct 1108752 CCGCCACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAG 1108693 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || ||| ||||| || || || || | |||| ||||| |||||||| ||||| Sbjct 1108692 AGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGG 1108633 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| | || | || | | || | |||||||| |||||||| Sbjct 1108632 ATGCCCTCCTTGTC-CTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCAC 1108574 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||| | ||| | || || || || || || || || || ||||||||| Sbjct 1108573 CTCCAACGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTGCATG 1108525 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496258541559840