Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq433 129 1e-24 seq298 129 1e-24 >seq433 Length=1580550 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| ||||| || ||||| || |||| ||||||||||| | || | ||||| Sbjct 1108737 AGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCC 1108678 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| ||||| || ||||| ||| || || || ||| Sbjct 1108677 TCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCC 1108618 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| || || | |||||| | || || || ||||||||||| ||| Sbjct 1108617 TGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTC 1108558 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || || || || || || || Sbjct 1108557 TTGCCCGTAAGCGTCTTGACGAAGATCTG 1108529 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| || || |||||||| |||| |||||||||| || || | ||||| Sbjct 1108281 AGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCC 1108222 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||||||||| |||||||| ||||| |||||||| ||| || || || ||| Sbjct 1108221 TCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCC 1108162 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || ||| |||| ||| || | | || || || | || || ||| Sbjct 1108161 TGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTC 1108102 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || |||||||| || || || || || || Sbjct 1108101 TTGCCCGTGAGGGTCTTGACGAAGATCTG 1108073 Score = 116 bits (128), Expect = 9e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||||||||| || |||||||| || | |||||| |||| | || | |||||| Sbjct 1108965 AGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCT 1108906 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| || ||||||||||| |||||||| || || || ||| ||||| || Sbjct 1108905 TCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCT 1108846 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| |||||| || | ||||| | | ||| || || | ||||| ||| Sbjct 1108845 TGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTC 1108786 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || ||||| || || || || || || Sbjct 1108785 TTGCCAGTGAGGGTCTTGACGAAGATCTG 1108757 >seq298 Length=714934 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 ||||| || |||||||| |||||||| || | ||||||||| | | || | || || Sbjct 385614 AGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCC 385555 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| || ||||||||||||||||| || || || ||| ||||| ||| Sbjct 385554 TCGAGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCC 385495 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| ||| ||| || | |||||| | | || || || | ||||| ||| Sbjct 385494 TGAATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTC 385435 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| |||||||| ||||| Sbjct 385434 TTGCCAGTAAGAGTCTTCACAAAGATTTG 385406 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | ||||| || |||||||| |||||||| || | ||| ||||||| || || Sbjct 385395 CGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTG 385336 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| |||||||| || || ||||| ||||| ||||| || ||| || ||| Sbjct 385335 CGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCT 385276 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || || ||||| ||||||| || | ||||| | | ||| || || | Sbjct 385275 TCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGG 385216 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| || ||||| || || ||||| || || Sbjct 385215 GTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTG 385178 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||||||||| |||||| || | |||||| |||| | ||| | |||||||| || || Sbjct 385834 GTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTG 385775 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || ||||| || ||||| ||||| || ||| || || ||||||||||| Sbjct 385774 CTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTT 385715 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 || || || | |||||| | || || || |||| ||||| ||||| || || Sbjct 385714 CGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGT 385655 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 || || ||||| || ||||| Sbjct 385654 AAGGGTCTTCACGAAGATTTG 385634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178912204731674