Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq370 257 2e-63 seq298 136 4e-27 seq433 116 4e-21 seq367 96.9 3e-15 seq353 89.7 5e-13 >seq370 Length=376741 Score = 257 bits (284), Expect = 2e-63 Identities = 396/561 (71%), Gaps = 7/561 (1%) Strand=Plus/Minus Query 132884 TGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGC 132943 |||||| | ||| ||||| ||| ||||| ||| || || | | ||||| ||||| Sbjct 251838 TGAACAGTAGGCAGGCAAAATCGGTATGCATGCCTTCATCACGGCTGATGAGCTCGTTAG 251779 Query 132944 TGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGC 133003 ||| ||||||||||||||||| || || || || | ||| || |||| |||||| || Sbjct 251778 AGAATGTCAAGCCGGGCATGAGACCACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGC 251719 Query 133004 CCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTT 133063 | || ||||| | |||||| || || ||||| || || || || ||| | || || | | Sbjct 251718 CGGAGAAGAAAATGCCCTCCACAGCAGCGAAGGCAACTAGACGTTCGGCAAAGGTAGACT 251659 Query 133064 CTTTGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTT 133123 |||| || ||||||| || ||||| ||||| || | |||| ||| || || || | Sbjct 251658 CTTTATCGGAGATCCAGGTGAGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGT 251599 Query 133124 CGATGGCGTTCAACAAACGGAGTTTCTCTTC-CGAGGAACGC-ACGTAGGTGTCGATGAG 133181 | | ||||| || | | | | | || || || | | |||||||||||| || Sbjct 251598 CAACGGCGTCGAAGAG--GTATTCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAG 251541 Query 133182 GGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCG 133241 || || | || || || | ||||||||| |||||| || || || || || || Sbjct 251540 CAGGGAGTATGTCTCTGAATGGATGTTCTCCATCATGATTTGGAAACCATAGAAACATCG 251481 Query 133242 CGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCC 133301 ||||| | |||| ||||| | | ||| ||||| || || || ||||||||||| || Sbjct 251480 TGCCTCAGCGGCCTGGACTTCATTGGAGAAGCGCTCCACGAGGTTCTCGTTGACGATACC 251421 Query 133302 GTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAA 133361 || ||||||||| ||||| || || || |||||| || |||||||||||||| | Sbjct 251420 ATCCGAGGCGGCGAAGAAGGCGAGGACATGTGAGATGAAGTGACGCTCGTTGTCGTTAAG 251361 Query 133362 GCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGA 133418 ||| | |||||| | ||||||||| ||||||| ||||||| | ||||| || || Sbjct 251360 GCGGTTGTTCCAGTCATGAAGGTCCTTGGAGAGGTCCATCTCCTCGGCAGTCCAGAAGGA 251301 Query 133419 CGCCTCGGCTTTTTTGTACAT 133439 || || || || |||||||| Sbjct 251300 GGCTTCAGCCTTCTTGTACAT 251280 >seq298 Length=714934 Score = 136 bits (150), Expect = 4e-27 Identities = 162/217 (75%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || || || || || ||||| || |||||| |||| |||||| | | Sbjct 385403 ATGCAAATCTTTGTGAAGACTCTTACTGGCAAGACAATCACCCTCGAGGTCGAGTCGTCT 385462 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| |||| | || || | ||||| || || |||||| |||| || Sbjct 385463 GACACCATTGACAACG-TTAAGGCGAAGATTCAGGACAAGGAAGGCATTCCCCCCGATCA 385521 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 |||||| ||||| | ||| ||||| ||||| || |||| ||||||||| ||||||||| Sbjct 385522 ACAGCGTCTCATCTTCGCTGGCAAGCAGCTCGAGGACGGTCGCACCCTCTCCGACTACAA 385581 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||| || ||||| | || || ||| | || || ||| Sbjct 385582 CATTCAGAAGGAGTCTACTCTCCATCTCGTCCTCCGT 385618 Score = 113 bits (124), Expect = 5e-20 Identities = 152/209 (73%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| ||||| || || || || ||||| ||||||||| | || |||||| | | Sbjct 385631 ATGCAAATCTTCGTGAAGACCCTTACCGGCAAGACCATCACCCTGGAAGTCGAGTCATCT 385690 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | |||| || || | ||||| ||||| |||||| |||||||| Sbjct 385691 GACACCATTGACAATGTCAAAGCGAAGATTCAGGACAAGGAGGGTATTCCCCCCGACCAA 385750 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | || ||||| || || || || | |||||| || || |||||| Sbjct 385751 CAGCGCCTTATCTTTGCTGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGATTACAAC 385810 Query 38424 ATCCAAAAGGA-AGCGACGCTGCATTTGG 38451 || || ||||| ||| || || || |||| Sbjct 385811 ATTCAGAAGGAGAGC-ACTCTCCACTTGG 385838 >seq433 Length=1580550 Score = 116 bits (128), Expect = 4e-21 Identities = 164/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||||||||| ||||| || |||| |||||| | || Sbjct 1108070 ATGCAGATCTTCGTCAAGACCCTCACGGGCAAGACCATTACTCTCGAAGTCGAGTCTTCC 1108129 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | |||| || |||| ||||| ||||| || || ||||||| Sbjct 1108130 GATACCATCGATAACG-TCAAAGCCAAGATCCAGGACAAGGAGGGCATCCCTCCCGACCA 1108188 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 || || || || | ||| || || ||||| || || | ||||||||| |||||||| Sbjct 1108189 GCAACGTCTGATCTTCGCTGGAAAGCAGCTCGAGGATGGGCGCACCCTGTCTGACTACAA 1108248 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 ||||| ||||| | || || || | || || ||| || | || || Sbjct 1108249 TATCCAGAAGGAGTCAACCCTTCACCTTGTTCTCCGTCTGCGGGGTGG 1108296 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || ||||| |||||||| |||||||| | || || ||| | || Sbjct 1108526 ATGCAGATCTTCGTCAAGACGCTTACGGGCAAGACCATCACGTTGGAGGTGGAGTCATCC 1108585 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || || | ||||| ||||| || || | |||||| Sbjct 1108586 GACACCATTGATAATGTCAAGGCCAAGATTCAGGACAAGGAGGGCATCCCTCCTGACCAA 1108645 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 || || || || | ||| || || ||||| || || | |||||||||| ||||||||| Sbjct 1108646 CAACGTCTGATCTTCGCTGGAAAGCAGCTAGAGGATGGGCGCACCCTCTCTGACTACAAC 1108705 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 ||||| || || | || || ||| | || || || Sbjct 1108706 ATCCAGAAAGAGTCTACACTCCATCTTGTTCTTCG 1108740 Score = 93.3 bits (102), Expect = 4e-14 Identities = 135/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| |||||||| |||| ||||| | || Sbjct 1108754 ATGCAGATCTTCGTCAAGACCCTCACTGGCAAGACCATCACTCTCGAGGTCGAATCTTCC 1108813 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | || | || || | || || || || |||||| | || ||| Sbjct 1108814 GACACAATTGACAATGTGAAGGCTAAGATTCAAGATAAGGAAGGTATTCCCCCTGATCAA 1108873 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | ||| ||||||||||| || || | || || ||| || |||||| Sbjct 1108874 CAGCGTCTTATCTTCGCCGGCAAACAGCTTGAAGATGGTCGTACGCTCTCTGATTACAAC 1108933 Query 38424 ATCCAAAAGGA 38434 || || ||||| Sbjct 1108934 ATTCAGAAGGA 1108944 >seq367 Length=894951 Score = 96.9 bits (106), Expect = 3e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||| || ||||||| ||||| | || | ||| ||||| ||||| || || | |||| Sbjct 540699 GAATCCCTCCCGACCAGCAGCGATTGATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGCA 540758 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 |||||| ||||||||||||||||||||| | || || || |||||||| ||| Sbjct 540759 CCCTCAGCGACTACAACATCCAAAAGGAGTCTACCCTTCACTTGGTGCTCCGT 540811 >seq353 Length=244416 Score = 89.7 bits (98), Expect = 5e-13 Identities = 87/112 (78%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 38347 GAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCA 38406 |||||||| | |||||||| || | || | ||| ||||| ||||| || || | |||| Sbjct 157077 GAATTCCCCCTGACCAACAACGATTGATCTTCGCTGGCAAGCAGCTCGAGGATGGTCGCA 157136 Query 38407 CCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCG 38458 |||||| ||||||||||||||| ||||| | || || || ||||| || || Sbjct 157137 CCCTCAGCGACTACAACATCCAGAAGGAGTCTACCCTCCACTTGGTCCTTCG 157188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500168911156480