Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq412 102 6e-16 >seq412 Length=416704 Score = 102 bits (112), Expect = 6e-16 Identities = 191/281 (68%), Gaps = 0/281 (0%) Strand=Plus/Minus Query 518015 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 518074 || ||||| ||||| ||||||||||| ||||| | || | || | || ||| | ||| Sbjct 396085 ACGAGACGGTTATCGAAATCTTCACCACCCAAGTGGGTGTCACCAGCGGTGGCTTTGACT 396026 Query 518075 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCA 518134 | ||| | || ||||| | | ||| || | |||||| ||||| || || | ||| Sbjct 396025 TCGAAGATACCCTCTTCGATGGTCAACAGGGATACATCGAAAGTTCCTCCTCCGAGATCG 395966 Query 518135 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 518194 ||||| || || || || | || || || ||||| || || | ||||| Sbjct 395965 AAAATGAGGACGTTTCGCTCGCCGGTGACCTTCTTGTCGAGACCGTAGGCGATGGCAGCG 395906 Query 518195 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 518254 ||||| || || || || || | | ||| || | ||||| || | || || || || Sbjct 395905 GCAGTAGGCTCGTTGATGATACGGAGAACGTTCATACCAGAGATGGTACCGGCGTCCTTG 395846 Query 518255 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGT 518295 |||||||| | ||| || ||||| || || ||||||||||| Sbjct 395845 GTGGCTTGACGTTGGGAGTCGTTGAAGTAGGCAGGAACAGT 395805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780791534311132