Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq412 219 5e-52 seq378 122 1e-22 seq264 93.3 5e-14 seq298 82.4 1e-10 >seq412 Length=416704 Score = 219 bits (242), Expect = 5e-52 Identities = 297/409 (73%), Gaps = 10/409 (2%) Strand=Plus/Minus Query 7406 TTCTTATGTTTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCT 7465 ||||| | || || || ||||||| | |||||| | ||| | |||||||||| Sbjct 396124 TTCTTGTTCTTGCGCTTGAACTCTTGAATGAAGTGGTTGACGAGACGGTTATCGAAATCT 396065 Query 7466 TCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATG 7525 |||||||||||||| || || || ||||| ||||||||||| |||||||| |||| ||| Sbjct 396064 TCACCACCCAAGTGGGTGTCACCAGCGGTGGCTTTGACTTCGAAGATACCCTCTTCGATG 396005 Query 7526 TTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCG 7585 | |||| || ||||| || || || || || || || |||||||| ||||| ||| Sbjct 396004 GTCAACAGGGATACATCGAAAGTTCCTCCTCCGAGATCGAAAATGAGGACGTT----TCG 395949 Query 7586 -TCGTCTTTG---TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAAT 7641 ||| | || ||||| ||||||||||| ||||| || || || || || || || || Sbjct 395948 CTCGCCGGTGACCTTCTTGTCGAGACCGTAGGCGATGGCAGCGGCAGTAGGCTCGTTGAT 395889 Query 7642 AATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGA 7701 ||||| ||| ||||| |||| || || | || || || || ||||| ||||| || Sbjct 395888 GATACGGAGAACGTTCATACCAGAGATGGTACCGGCGTCCTTGGTGGCTTGACGTTGGGA 395829 Query 7702 ATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGA 7761 ||||| |||||||| || || || ||||| |||| | || | | ||||| || || Sbjct 395828 GTCGTTGAAGTAGGCAGGAACAGTGACGACAGCGTTGTTAACAGTGGTGCCGAGGTATGA 395769 Query 7762 TTCCGCGATATCTTTCATTTTG-GTAAGAACCATCGATGAAATCTCTTC 7809 ||| ||| | || ||||| ||| | ||| ||||| || || | ||||| Sbjct 395768 TTCTGCGGTCTCCTTCATCTTGAGCAAG-ACCATGGAGGAGACTTCTTC 395721 Score = 214 bits (236), Expect = 2e-50 Identities = 510/771 (66%), Gaps = 0/771 (0%) Strand=Plus/Minus Query 6635 CCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTT 6694 ||||| || || || || || || | |||||| || | || ||| || ||| Sbjct 396951 CCCTTGTCGTTGGTGATGGTGATGCGGTTGGATTTGCCGGTGGTCTTGTCGGAAGCGGAG 396892 Query 6695 ACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTC 6754 |||||||| |||||||| ||||||| |||||| | || | ||||| || || | Sbjct 396891 ACATTCAAGATACCATTGGCATCAATATCGAAGGTGACTTCGATTTGAGGAACGCCACGG 396832 Query 6755 GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTC 6814 || |||| || || || | | || || | || || || |||| ||| | | Sbjct 396831 GGAGCGGGAGGGATGCCAGACAGCTCGAACTTGCCGAGCAAGTTGTTGTCCTTGGTGCGA 396772 Query 6815 TTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCCGTTGAG 6874 ||| ||||| || ||||||| ||| ||| | ||||| || || || ||| Sbjct 396771 GCACGCTCACCCTCGTAGACTTGAATGAGCACACCTGGTTGGTTGTCGGCGTAGGTGGAG 396712 Query 6875 AAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTCATAATA 6934 || |||| ||||| | || | || || |||| | || | | |||||| | | Sbjct 396711 AAAATTTCGGACTTCTTGGTAGGGACAGTGGTGTTTCGCTTGATGAGAGCGGTCATGACA 396652 Query 6935 CCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGGTCTTGA 6994 ||||| || |||| || || || ||||| | ||||| | ||| | || ||||||| Sbjct 396651 CCACCAGCTGTCTCGATACCGAGGGAGAGAGGAGCAACGTCAAGGAGCAGCAAGTCTTGA 396592 Query 6995 ACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTATGCGACC 7054 || ||||| | | ||| || |||||||| | || ||||| ||||| Sbjct 396591 GTCTTCTCAGAGGTATCACCAGAGAGGATAGCAGCTTGGACGGCAGCACCGTAGGCGACG 396532 Query 7055 GCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATAATCCGATAACATT 7114 |||||||||||||| || | || || | || || || || || | || || | | Sbjct 396531 GCCTCATCGGGGTTGATGCTCTTGTTGGGCTCCTTGCCATTGAAGAAGTCGGAAACGAGC 396472 Query 7115 TGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT 7174 | ||| ||||| || || || ||||| || | ||||||||| | || || | Sbjct 396471 TTGACAATACGAGGGATACGGGTGGAGCCACCAACGAGAACGATTTCGTGGACGTTAGCC 396412 Query 7175 TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAG 7234 || |||||||| ||||| ||||| ||| ||||| || || | | ||||| | Sbjct 396411 TTGTCGATCTTAGAGTCACGAAGGACTTTCTCGACGGGCTCGAGGGTGCTTCGGAAAAGA 396352 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294 ||| ||||||||||| ||||| |||||||||| ||| ||||| || |||| || ||| Sbjct 396351 TCCTGGCACAGTTCCTCGAAACGGGCACGGGTAAGGGAAGTATAAAAGTCAATACCATCG 396292 Query 7295 TATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGC 7354 | | || || ||||| || | ||||| | | ||||| | |||||||| ||||| Sbjct 396291 AACAGAGAGTCGATTTCGATTGAGGTTTGGGTAGCGGAAGAGAGGGTTCGCTTAGCGCGT 396232 Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCT 7405 || || || ||||| | |||||||| |||||| ||||| || || | |||| Sbjct 396231 TCGCAAGCAGTTCGGAGACGACGAACGGCACGAGGGTTGCCAGACAAATCT 396181 Score = 105 bits (116), Expect = 8e-18 Identities = 122/163 (75%), Gaps = 6/163 (4%) Strand=Plus/Minus Query 7956 CAAAAACT---GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAA 8012 |||||||| ||||| | |||||||| || ||| |||||||| || || ||||||| Sbjct 395468 CAAAAACTTACGTGTTGTGAGGGTTCATCGCGACTTGATTCTTCGCGGCATCACCGATAA 395409 Query 8013 GACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGT 8072 |||| || || || | || | ||| || || || || ||||| || || ||||||| Sbjct 395408 GACGCTC---GTTCTCAGAGAAGGAGACATAGGAAGGTGTGGTTCGGTTACCCTGGTCGT 395352 Query 8073 TCGCAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 | ||||| ||||| || ||||| || |||||||| ||||| || Sbjct 395351 TGGCAATGATTTCCACTCGGTCATTCTGCCAGACACCGACACA 395309 >seq378 Length=400989 Score = 122 bits (134), Expect = 1e-22 Identities = 190/269 (71%), Gaps = 6/269 (2%) Strand=Plus/Minus Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||||||||||||||| | || || || || | ||| || ||||| | |||| ||| Sbjct 89281 TCGAAATCTTCACCACCAAGATGGGTGTCACCGGAGGTGGCCTTGACGGCGAAGACACCA 89222 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| || | || ||||| || || || ||||| || || || ||||| ||| Sbjct 89221 CCGCTGATGTTCAAGAGAGACACATCGAAAGTTCCTCCACCGAGATCGAAGATGAGAACG 89162 Query 7577 TTCGTATCGTCGTCTTTGTTCTTA---TCGAGACCGTACGCGATAGCCGCCGCCGTTGGT 7633 ||| | ||| ||||| | | | | ||||||||||| ||||| || || || || || Sbjct 89161 TTCCTCTCG--GTCTTGGAT-TGACGGTCGAGACCGTAAGCGATGGCGGCAGCGGTGGGC 89105 Query 7634 TCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGT 7693 ||||| || ||||| || | || || || || | | ||||| || || || Sbjct 89104 TCATTGATGATACGGAGGACCTCGAGACCGGCGATGGCACCGGCATCCTTGGTGGCCAAA 89045 Query 7694 CGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||||||| ||||| ||||| || ||||| Sbjct 89044 CGTTGCGAGTCGTTGAAGTATGCGGGGAC 89016 >seq264 Length=137202 Score = 93.3 bits (102), Expect = 5e-14 Identities = 176/257 (68%), Gaps = 3/257 (1%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||||||||| | || || || || ||||| || ||| || |||| ||| Sbjct 115104 ATCGAAATCTTCACCACCAAGATGGGTGTCACCAGCGGTGGCCAAGACCTCGAAGACACC 115045 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | | || ||||| || ||||| ||||| || || | | || | Sbjct 115044 GTCGTCGATGGAGAGGAGGGAGACATCGAAAGTACCTCCACCGAGATCGTAGACGA-TGA 114986 Query 7576 GTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTC 7635 || | || || | ||||||| |||||||| ||||| || || || || ||||| Sbjct 114985 TTTGGGAT--TCACCGCCCTTCTTATTAAGACCGTAGGCGATGGCGGCGGCGGTAGGTTC 114928 Query 7636 ATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCG 7695 || || ||||| || | || |||||||| || | || || || || ||||| || Sbjct 114927 GTTGATGATACGGAGGACCTGGAGACCAGCAATGGTGCCGGCGTCCTTGGTGGCTTGACG 114868 Query 7696 TTGCGAATCGTTAAAGT 7712 ||| | ||||| |||| Sbjct 114867 TTGAGCGTCGTTGAAGT 114851 >seq298 Length=714934 Score = 82.4 bits (90), Expect = 1e-10 Identities = 100/132 (76%), Gaps = 6/132 (5%) Strand=Plus/Minus Query 7606 ACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTC-AGGCCAG 7664 |||||| |||| ||| || ||||||||||| || || | ||||||| | ||| || |||| Sbjct 262061 ACCGTAGGCGAGAGCAGCAGCCGTTGGTTCGTTGATGACACGAAGA-ACTTCGAGACCAG 262003 Query 7665 CAATAGTTG--CCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 | || ||| | ||||| || || |||||||| || | |||||| || ||||| || || Sbjct 262002 CGAT--TTGACCAGCATCCTTGGTGGCTTGTCGCTGAGCATCGTTGAAATAGGCAGGAAC 261945 Query 7723 CGTTACGACCGC 7734 || | ||| || Sbjct 261944 GGTGATGACGGC 261933 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635127861842480