Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq433 84.2 3e-11 seq415 82.4 9e-11 >seq433 Length=1580550 Score = 84.2 bits (92), Expect = 3e-11 Identities = 174/254 (69%), Gaps = 4/254 (2%) Strand=Plus/Plus Query 176764 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 176823 ||| |||||||||||||| || ||||| || || |||| | || |||||| || Sbjct 1030876 ATCAGTCATGATCATGAGTCGCCCATAACGGAGACTGGAAGCGTCCGAATAGTCTTTGTT 1030935 Query 176824 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTG 176882 ||||| || |||| |||||||||| || ||||| |||| ||| ||| ||| | Sbjct 1030936 GTGTTGCAGCCCCATAATCTTCTTGATAT-TTTGAATTTCTTCATTTTTCATGATCTG-G 1030993 Query 176883 TGACAGAG-GCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGA 176941 | | | | || || || ||||| |||| || ||||| ||||| |||||| | | Sbjct 1030994 TCATGGCGAGCCTCCCGTACATTGAGCAACTTTCCTCGAAGCGGGAAAACACCGAAATTG 1031053 Query 176942 TCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTC 177001 || |||||||| || ||||| || | || || | ||| || || || || || || Sbjct 1031054 TCTCGACCAACGACTCCCAGACCAGCGATGGCCAGGGCTTTAGCCGAGTCGCCTTCGGTT 1031113 Query 177002 ACGATGAGTGTACA 177015 | ||| | ||||| Sbjct 1031114 AAGATTAAAGTACA 1031127 >seq415 Length=258813 Score = 82.4 bits (90), Expect = 9e-11 Identities = 149/216 (69%), Gaps = 8/216 (4%) Strand=Plus/Minus Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT- 112651 || || ||| | ||| | || |||||||| || || || |||||||| |||| ||||| Sbjct 185470 TCCAACATGCGTCACAGGCCTATTGGTCTTGGCGTTCAGGGTCTCGCCGATGCTTTCATG 185411 Query 112652 --TCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708 |||| || | || ||| |||||| | | ||||| ||| | || | || || Sbjct 185410 GCTCTTCGT----ATGCCTTTCGATTCCCAGGCTGCGAAAGAACTTAACATCCAGATCTT 185355 Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768 ||||| || || |||||||| || ||||| || || || | || | ||||||||| Sbjct 185354 CGAGACCATCTACCACGCCGCGCTCGAGGCCAGCTCCGAACTCGCTGCTCGTGATGGTCC 185295 Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804 || || || | || || ||| ||||||||||| Sbjct 185294 CTACGAGACTTGGGAAGGCAGTCCTGCTTCACAAGG 185259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620737573727840