Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq433 84.2 3e-11
seq415 82.4 9e-11
>seq433
Length=1580550
Score = 84.2 bits (92), Expect = 3e-11
Identities = 174/254 (69%), Gaps = 4/254 (2%)
Strand=Plus/Plus
Query 176764 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 176823
||| |||||||||||||| || ||||| || || |||| | || |||||| ||
Sbjct 1030876 ATCAGTCATGATCATGAGTCGCCCATAACGGAGACTGGAAGCGTCCGAATAGTCTTTGTT 1030935
Query 176824 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAA-CTCTTGGTTTGATGTGAGCTGTG 176882
||||| || |||| |||||||||| || ||||| |||| ||| ||| ||| |
Sbjct 1030936 GTGTTGCAGCCCCATAATCTTCTTGATAT-TTTGAATTTCTTCATTTTTCATGATCTG-G 1030993
Query 176883 TGACAGAG-GCATCACGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGA 176941
| | | | || || || ||||| |||| || ||||| ||||| |||||| | |
Sbjct 1030994 TCATGGCGAGCCTCCCGTACATTGAGCAACTTTCCTCGAAGCGGGAAAACACCGAAATTG 1031053
Query 176942 TCGCGACCAACCACAGAGAGACCCGCAACCGCGAGCGTTTTCGCAGAATCACCCTCTGTC 177001
|| |||||||| || ||||| || | || || | ||| || || || || || ||
Sbjct 1031054 TCTCGACCAACGACTCCCAGACCAGCGATGGCCAGGGCTTTAGCCGAGTCGCCTTCGGTT 1031113
Query 177002 ACGATGAGTGTACA 177015
| ||| | |||||
Sbjct 1031114 AAGATTAAAGTACA 1031127
>seq415
Length=258813
Score = 82.4 bits (90), Expect = 9e-11
Identities = 149/216 (69%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 112593 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT- 112651
|| || ||| | ||| | || |||||||| || || || |||||||| |||| |||||
Sbjct 185470 TCCAACATGCGTCACAGGCCTATTGGTCTTGGCGTTCAGGGTCTCGCCGATGCTTTCATG 185411
Query 112652 --TCTTTGTCGCCACGCATTT-GATTCCGACGAAGCGAAGGAAATCAATGCGCGTATATT 112708
|||| || | || ||| |||||| | | ||||| ||| | || | || ||
Sbjct 185410 GCTCTTCGT----ATGCCTTTCGATTCCCAGGCTGCGAAAGAACTTAACATCCAGATCTT 185355
Query 112709 TGAGACAATGTATCACGCCGCTCTTGAGGCGAGTTCGGAGTTGGCAGAGGTTGATGGTCC 112768
||||| || || |||||||| || ||||| || || || | || | |||||||||
Sbjct 185354 CGAGACCATCTACCACGCCGCGCTCGAGGCCAGCTCCGAACTCGCTGCTCGTGATGGTCC 185295
Query 112769 ATATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGG 112804
|| || || | || || ||| |||||||||||
Sbjct 185294 CTACGAGACTTGGGAAGGCAGTCCTGCTTCACAAGG 185259
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620737573727840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |