Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq298 152 1e-31 seq433 149 1e-30 >seq298 Length=714934 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||| |||||| ||| || ||||| |||||||| | |||||| | |||||||||||| || Sbjct 385834 GTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGAGTTG 385775 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || |||||||| || |||||||| || ||||| || || ||||| ||||| || Sbjct 385774 CTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAATCTT 385715 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||| || ||||||||||| || || ||||| ||||| | ||||| || || Sbjct 385714 CGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGCCGGT 385655 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | |||||| Sbjct 385654 AAGGGTCTTCACGAAGATTTGCAT 385631 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| ||||| || ||||| || || || | || || | || |||||| Sbjct 385383 ACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCG 385324 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || || |||||||| ||||| || || ||||| |||||||| || ||||| Sbjct 385323 AGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGG 385264 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||| ||||| ||| |||||| |||||||| | |||||| Sbjct 385263 ATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTC 385204 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || || || | ||||| Sbjct 385203 CCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || ||||| ||||| || ||||| ||||| |||| || || | || || ||| Sbjct 385611 ACGAGATGGAGAGTAGACTCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCG 385552 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGA 195051 |||||||| || |||||||| || || ||||| || || ||||||||||| ||||| ||| Sbjct 385551 AGCTGCTTGCCAGCGAAGATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGA 385492 Query 195052 ATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTT 195111 || || ||| ||||| ||||||||||| || || || || ||||| | ||||| Sbjct 385491 ATCTTCGCCTTAACGTTGTCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTG 385432 Query 195112 CCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||| || || || | |||||| Sbjct 385431 CCAGTAAGAGTCTTCACAAAGATTTGCAT 385403 >seq433 Length=1580550 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||||||||| || ||||| || || |||||||| || | || || | |||||| || Sbjct 1108279 AACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTGCGCCCATCCTC 1108220 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||||||| || |||||||| || ||||| ||||| ||||| ||||| || ||||| || Sbjct 1108219 GAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCCTCCTTGTCCTG 1108160 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || |||||||| || ||||| || ||| || ||||| || |||| ||||| Sbjct 1108159 GATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGACTTCGAGAGTAATGGTCTT 1108100 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1108099 GCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||||||||| || |||||||| || ||||| |||||||| | || || | |||||||| Sbjct 1108963 AACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACGACCATCTTC 1108904 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||||| || || ||||||||||| || ||||| || || ||||| ||||| || ||||| Sbjct 1108903 AAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTCCTTATCTTG 1108844 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || ||| || || ||||| ||||| ||| ||| || || || || | ||||| Sbjct 1108843 AATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAGAGTGATGGTCTT 1108784 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1108783 GCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 140 bits (154), Expect = 7e-28 Identities = 157/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 |||||| || || || |||||||| || || ||||| || | || || | |||||| || Sbjct 1108735 AACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTC 1108676 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || ||||||||||| ||||| ||||| || ||||| || Sbjct 1108675 TAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTG 1108616 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 ||| || |||||| || ||||||||||| || ||||| || | || | ||||| Sbjct 1108615 AATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTT 1108556 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | || || ||||| | ||||| Sbjct 1108555 GCCCGTAAGCGTCTTGACGAAGATCTGCAT 1108526 Score = 123 bits (136), Expect = 6e-23 Identities = 154/211 (73%), Gaps = 0/211 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| || ||||| || || || || ||||| || ||||||| || || | ||||| || Sbjct 1108507 AACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCATCCTC 1108448 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| ||||| || || || || || ||||||||||| ||||| |||||||| ||||| || Sbjct 1108447 GAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTGTCCTG 1108388 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 || || ||| || || || |||||||| || || || || || || | ||||| Sbjct 1108387 GATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATGGTCTT 1108328 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCATT 195141 || || | || || ||||| | ||||||| Sbjct 1108327 GCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297 Score = 107 bits (118), Expect = 4e-18 Identities = 86/104 (83%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCG 194991 || || || |||||||| || || || ||||||||||| | ||||| | ||| || || Sbjct 1108050 ACGAGATGTAGAGTGGATTCCTTCTGGATATTGTAATCCGAGAGAGTGCGCCCGTCCTCA 1107991 Query 194992 AGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAAT 195035 |||||||| || ||||||||||| |||||||||||||||||||| Sbjct 1107990 AGCTGCTTGCCAGCGAAGATAAGACGTTGTTGGTCTGGAGGAAT 1107947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109472758125074