Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq298 107 1e-18 seq433 104 2e-17 >seq298 Length=714934 Score = 107 bits (118), Expect = 1e-18 Identities = 149/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 34774 CCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833 ||||||| | ||||| || ||||||||||| || || ||||| | || |||| || | Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779 Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893 | || || || ||||| || || || || ||||| | || | ||||||||||| || Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719 Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953 ||||| |||||| | || | ||| | ||| || || | ||| ||||| || | Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659 Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982 | || || |||||||| ||||| |||||| Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCATA 385630 Score = 89.7 bits (98), Expect = 3e-13 Identities = 135/192 (70%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||| ||||| || ||| | || | || || ||||| || || || || Sbjct 385593 TCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAG 385534 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || || || | || | || |||||||| ||||||| || ||| Sbjct 385533 ATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTG 385474 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | ||| || |||| ||| || || || || || |||||||||||| Sbjct 385473 TCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACA 385414 Query 34971 AAGATCTGCATA 34982 ||||| |||||| Sbjct 385413 AAGATTTGCATA 385402 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||||||||||||||| || ||| | || | || || ||||| || || ||||| Sbjct 385365 TCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAG 385306 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || |||||||| || | || | || ||||| || |||||| || ||| Sbjct 385305 ATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTA 385246 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | || | ||| | || || || | ||| || || || || ||||| ||||| ||| Sbjct 385245 TCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACA 385186 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 385185 AAGATCTGCAT 385175 >seq433 Length=1580550 Score = 104 bits (114), Expect = 2e-17 Identities = 163/233 (70%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812 |||| |||| || | | ||| | ||||| || || ||||| || || ||||| | Sbjct 1108298 TTCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAG 1108239 Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872 | ||| | || |||| || ||||| ||||| || || || || ||||||||||| | | Sbjct 1108238 ACAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAG 1108179 Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCC 34928 | | ||||||||||| ||||| |||||| | ||||||| || | | Sbjct 1108178 GGATGCCCTCCTTGTCCTGGATCTTGGCTTTGAC----GTTATCGATGGTATCGGAAGAC 1108123 Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || |||| || ||||| || |||||||| ||||| || ||||||||||| Sbjct 1108122 TCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070 Score = 93.3 bits (102), Expect = 3e-14 Identities = 139/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 |||||||| ||||| ||||| || ||| | || |||| || ||||| ||||| || || Sbjct 1108716 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAG 1108657 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || ||||| ||||| | || | ||||||||||| |||||| ||||| || Sbjct 1108656 ATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC--AT 1108599 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 |||| || || | ||| || || | || ||||| || ||||| || ||||| Sbjct 1108598 --TATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTT 1108541 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 1108540 GACGAAGATCTGCAT 1108526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324631139074416