Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq298 107 1e-18
seq433 104 2e-17
>seq298
Length=714934
Score = 107 bits (118), Expect = 1e-18
Identities = 149/209 (71%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 34774 CCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCA 34833
||||||| | ||||| || ||||||||||| || || ||||| | || |||| || |
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 34834 GCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAA 34893
| || || || ||||| || || || || ||||| | || | ||||||||||| ||
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTGAA 385719
Query 34894 TCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTC 34953
||||| |||||| | || | ||| | ||| || || | ||| ||||| || |
Sbjct 385718 TCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTGC 385659
Query 34954 CCGTGAGAGTCTTCACAAAGATCTGCATA 34982
| || || |||||||| ||||| ||||||
Sbjct 385658 CGGTAAGGGTCTTCACGAAGATTTGCATA 385630
Score = 89.7 bits (98), Expect = 3e-13
Identities = 135/192 (70%), Gaps = 0/192 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||| ||||| || ||| | || | || || ||||| || || || ||
Sbjct 385593 TCCTTCTGAATGTTGTAGTCGGAGAGGGTGCGACCGTCCTCGAGCTGCTTGCCAGCGAAG 385534
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || || || || || | || | || |||||||| ||||||| || |||
Sbjct 385533 ATGAGACGCTGTTGATCGGGGGGAATGCCTTCCTTGTCCTGAATCTTCGCCTTAACGTTG 385474
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | ||| || |||| ||| || || || || || ||||||||||||
Sbjct 385473 TCAATGGTGTCAGACGACTCGACCTCGAGGGTGATTGTCTTGCCAGTAAGAGTCTTCACA 385414
Query 34971 AAGATCTGCATA 34982
||||| ||||||
Sbjct 385413 AAGATTTGCATA 385402
Score = 87.8 bits (96), Expect = 1e-12
Identities = 134/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|| ||||||||||||||||| || ||| | || | || || ||||| || || |||||
Sbjct 385365 TCCTTCTGAATGTTATAGTCAGACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAG 385306
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || |||||||| || | || | || ||||| || |||||| || |||
Sbjct 385305 ATAAGACGTTGCTGATCGGGAGGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTA 385246
Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970
| || | ||| | || || || | ||| || || || || ||||| ||||| |||
Sbjct 385245 TCAATAGTGTCAGAAGATTCCACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACA 385186
Query 34971 AAGATCTGCAT 34981
|||||||||||
Sbjct 385185 AAGATCTGCAT 385175
>seq433
Length=1580550
Score = 104 bits (114), Expect = 2e-17
Identities = 163/233 (70%), Gaps = 8/233 (3%)
Strand=Plus/Minus
Query 34753 TTCCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCG 34812
|||| |||| || | | ||| | ||||| || || ||||| || || ||||| |
Sbjct 1108298 TTCCACCCCGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAG 1108239
Query 34813 AAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCG 34872
| ||| | || |||| || ||||| ||||| || || || || ||||||||||| | |
Sbjct 1108238 ACAGGGTGCGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAG 1108179
Query 34873 GCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGAT----TCACCGGCC 34928
| | ||||||||||| ||||| |||||| | ||||||| || | |
Sbjct 1108178 GGATGCCCTCCTTGTCCTGGATCTTGGCTTTGAC----GTTATCGATGGTATCGGAAGAC 1108123
Query 34929 TCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| || |||| || ||||| || |||||||| ||||| || |||||||||||
Sbjct 1108122 TCGACTTCGAGAGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTGCAT 1108070
Score = 93.3 bits (102), Expect = 3e-14
Identities = 139/195 (71%), Gaps = 8/195 (4%)
Strand=Plus/Minus
Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850
|||||||| ||||| ||||| || ||| | || |||| || ||||| ||||| || ||
Sbjct 1108716 TCTTTCTGGATGTTGTAGTCAGAGAGGGTGCGCCCATCCTCTAGCTGCTTTCCAGCGAAG 1108657
Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910
|| || ||||| ||||| | || | ||||||||||| |||||| ||||| ||
Sbjct 1108656 ATCAGACGTTGTTGGTCAGGAGGGATGCCCTCCTTGTCCTGAATCTTGGCCTTGAC--AT 1108599
Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966
|||| || || | ||| || || | || ||||| || ||||| || |||||
Sbjct 1108598 --TATCAATGGTGTCGGATGACTCCACCTCCAACGTGATGGTCTTGCCCGTAAGCGTCTT 1108541
Query 34967 CACAAAGATCTGCAT 34981
|| |||||||||||
Sbjct 1108540 GACGAAGATCTGCAT 1108526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324631139074416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |