Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq433 107 2e-17 >seq433 Length=1580550 Score = 107 bits (118), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || ||||| || ||||| || || ||| |||||||||| || || | Sbjct 1108972 GAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGTACG 1108913 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||||||||| ||||| ||||| || ||||| | || |||||||| ||||| ||||| Sbjct 1108912 ACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACCTTC 1108853 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 ||||||||||| || || || |||||||| || | || | | ||||||| Sbjct 1108852 CTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTC-GGAAGATTCGACCTCGAGAG 1108794 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || ||||| || || || ||||| || |||||| Sbjct 1108793 TGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCATA 1108753 Score = 87.8 bits (96), Expect = 1e-11 Identities = 153/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 |||||| || || ||||||||||| ||| || ||| || ||||| | || || | Sbjct 1108516 GAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACG 1108457 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 ||| || ||||| || ||||||||||| || | ||| || |||||||| || ||||| Sbjct 1108456 ACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTC 1108397 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || || || || || || || || || || | ||| | | ||||||| Sbjct 1108396 CTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTC-GGATGACTCGACCTCGAGAG 1108338 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCAT 563474 | | || || ||||| || || || ||||| |||||||| Sbjct 1108337 TGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCAT 1108298 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029263105834780