Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq370 150 2e-31 >seq370 Length=376741 Score = 150 bits (166), Expect = 2e-31 Identities = 242/346 (70%), Gaps = 4/346 (1%) Strand=Plus/Plus Query 37176 CATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAAT 37235 || |||||||| ||| | || || || | ||| || | || || || || || ||| Sbjct 249683 CAAGCAAAATCGGTATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAAT 249742 Query 37236 CCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAA 37295 |||||||| || |||| ||| | |||||||| || || ||||| ||||| ||||| ||| Sbjct 249743 CCTGGCATCAATCCTCGCTTTCTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAA 249802 Query 37296 ATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAA--GTTGAACTATAATCAG 37353 || ||||| |||||||| || || ||||| | | |||||| | || | | || Sbjct 249803 ATGCCTTCCACTGCTGCGAAAGCAACAAGCC--GCTCCGAAAATGCGGATGTCTCGGTAG 249860 Query 37354 AAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTT 37413 |||||||||| || ||| ||||||||| || | | | ||| ||||| || || Sbjct 249861 AAATCCATTTCAATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCC 249920 Query 37414 TTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 |||||||||| ||| ||| ||| | || ||||| |||||||| | |||| Sbjct 249921 GGAAGAGAAAGTCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACG 249980 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACA 37519 || ||||| | |||||| || || ||||||||||| ||||| Sbjct 249981 CCTCGGAGTGCACATTTTCGATCATAATTTGAAAACCATAGAAACA 250026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592312194736880