Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq98 102 7e-17
seq406 96.9 3e-15
>seq98
Length=51396
Score = 102 bits (112), Expect = 7e-17
Identities = 234/347 (67%), Gaps = 4/347 (1%)
Strand=Plus/Minus
Query 30041 CTTTGGGGTTCCAGGCGCACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGT 30100
||||||||||||| |||| || ||| || | |||||| ||| || || |||| |
Sbjct 20892 CTTTGGGGTTCCAAGCGCTCATGATAATTCTCCTGTCGGTTGGATTCGTCTTGATTTTCT 20833
Query 30101 CCACGGCGTTTTGCAGCTGATCCACCCCCATCCCCGAGTAGTC-TGCCCTCATGTCCGTG 30159
| | | || || || || || ||| || |||||||| || | || |||
Sbjct 20832 CGATACATTCGTGTAGTTGGTCGACGCCCTGGCCAGAGTAGTCATGGTCGCA-GTCGACA 20774
Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219
|| || | ||| || || | ||| ||||| || || || ||||| | || |||||| |
Sbjct 20773 TATTCAGTTCCAAAGTGTCGCCATTGGAAGCCATATACGGGTCCTAAATCGCCCTCTCGC 20714
Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279
||||| | | || ||||| |||||||| || | || ||||| | |||||||||||
Sbjct 20713 CTGTGACCCAGCCCTCTCTTCTCCAAAAACTCCTTCGAGCCGTTCCCATCCCAGATCTTG 20654
Query 30280 ACCCCCTTCTCGGAGAGCTCTTTGGAGTTTG-TGGACCCTCTGACGAACCACAGCAGCTC 30338
|| || ||||| || ||| ||| || | | | |||| | || ||||| ||||||||
Sbjct 20653 ACGCCTTTCTCCGAAAGCAGTTTCGAATCGGTTCGACCAT-GCACAAACCATAGCAGCTC 20595
Query 30339 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
|| | | | | |||| |||||| ||||| || || ||||
Sbjct 20594 TTCAATAATGCCACGTAAAAACGTCCTCTTTGTCGTCAGAAGAGGAA 20548
>seq406
Length=30602
Score = 96.9 bits (106), Expect = 3e-15
Identities = 160/227 (70%), Gaps = 3/227 (1%)
Strand=Plus/Plus
Query 30160 TACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCC 30219
|| || |||||||| || | ||| ||||| || || || ||||| | || |||||| |
Sbjct 14836 TATTCAGCTCCGAAGTGTCGCCATTGGAAGCCATATACGGGTCCTAAATCGCCCTCTCAC 14895
Query 30220 CTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTT 30279
|| || | | || ||||| |||||||| ||| | || ||||| |||||||||||||
Sbjct 14896 CTATGACCCAGCCCTCTCTTCTCCAAAAACTCTTTCGAGCCGTTCACGTCCCAGATCTTG 14955
Query 30280 ACCCCCTTCTCGGAGAGC-TCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTC 30338
|| |||||||| || ||| ||| | | | |||| | || ||||| ||||||||
Sbjct 14956 ACGCCCTTCTCAGAAAGCAGCTTCGAATCGATTCGACCAT-GCACAAACCATAGCAGCTC 15014
Query 30339 CTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAA 30385
|| | ||| | | |||| ||| || ||||| || || ||||
Sbjct 15015 TTCAATAACGCCACGCAAAAACGTCCTGTT-GTCGTCAGAAGAGGAA 15060
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408614502423206
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |