Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq370 197 3e-45
seq415 105 1e-17
>seq370
Length=376741
Score = 197 bits (218), Expect = 3e-45
Identities = 392/569 (69%), Gaps = 15/569 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | ||||||||||||||| || ||| |||||| ||||| ||||| || ||
Sbjct 251271 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACCTC 251330
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTT--TCTC 25590
|||||||| | | | |||| || || || | | | |||||| || || ||||
Sbjct 251331 TCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGACA-ACGAGCGTCACTTCATCTC 251389
Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGA 25649
| | || | || ||||| || ||||| |||||||| || |||||||| || ||| ||
Sbjct 251390 ACAT--GTCCTCGCCTTCTTCGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTG-GA 251446
Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709
| | ||| ||| ||||| ||| || ||||| |||||||| |||||||| ||
Sbjct 251447 GCGCTTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCAT 251506
Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGT 25769
|| || || | || || ||| || || |||| | || ||||| | |||
Sbjct 251507 GATGGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCC 251566
Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGG 25828
|||| || | || || || | ||| | || ||| || || ||||||||| ||| |
Sbjct 251567 CGCCCAGCGCGAATACCTCTTCGACGCCGTTGA-CACTATCCCTTGCATCAAGAAGAAAG 251625
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTA 25887
| ||||| | | |||||| | | | || | |||| |||| ||| || || ||
Sbjct 251626 CCGACTGGGCTCTCACCTGGATCTCC-GATAAAGAGTCTACCTTTGCCGAACGTCTAGTT 251684
Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947
||||| ||||||||||||||||| || ||| ||| || || || ||||||||||| |
Sbjct 251685 GCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGTTG 251744
Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007
||| || || ||||||||| || || || ||||||||||||||| | || ||
Sbjct 251745 AAGAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTGATGAA 251804
Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCT 26036
|| | || | |||||||||||||| ||
Sbjct 251805 GGCATGCATACCGATTTTGCCTGCCTACT 251833
Score = 138 bits (152), Expect = 2e-27
Identities = 298/439 (68%), Gaps = 10/439 (2%)
Strand=Plus/Minus
Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGAGAGATTCACCAG 25661
|| |||||||| | || ||||| || || |||||||| || ||| || | ||| | ||
Sbjct 250110 GCGTTCTTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTG-GAACGCTTCTCGAG 250052
Query 25662 GGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGT 25721
||||||||| | ||||||| |||||||| ||||| || || |||||||||||
Sbjct 250051 TGAAGTGCAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGT 249992
Query 25722 GCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGCCGAGAG 25778
|||||| |||| |||| || || || || || ||||| | || | ||| |
Sbjct 249991 GCACTCCGAGGCGTATTCC---CTCCTAATTGACACTTACATCAAGGATCCTGACGAACG 249935
Query 25779 AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGC 25838
|| || || | || ||||| ||| || |||||| ||||| |||||
Sbjct 249934 GGACTTTCTCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGC 249875
Query 25839 CATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGC 25898
|||| ||||| | | ||| | | ||| |||||||| || || || || ||
Sbjct 249874 ATTGAAATGGATTTCTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGC 249815
Query 25899 TGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGG 25958
||||| ||||| ||||| || || ||||| |||||||| ||| | | || ||
Sbjct 249814 AGTGGAAGGCATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGG 249755
Query 25959 GACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACA 26017
||||| || || ||||| ||||||||||| ||||| | |||||||| | || |
Sbjct 249754 ATTGATGCCAGGATTG-ACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATA 249696
Query 26018 GAGATTTTGCCTGCCTGCT 26036
|||||||| ||||||||
Sbjct 249695 CCGATTTTGCTTGCCTGCT 249677
>seq415
Length=258813
Score = 105 bits (116), Expect = 1e-17
Identities = 144/196 (73%), Gaps = 4/196 (2%)
Strand=Plus/Plus
Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479
|| || ||||||||||||||||| |||||| |||| ||| || || | | |||
Sbjct 185331 AGCGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTAAGTTCTTTCGCAGCCTGGGAA 185390
Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538
||| |||||||| || | |||||| | ||||| || ||||| || || | ||| ||
Sbjct 185391 TCGAAAGGCATACGAAGAGCCATGAAAG-CATCGGCGAGACCCTGAACGCCAAGACCAAT 185449
Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597
|||||||| | | |||||| | |||| ||||| || | ||| || |||||||||| |
Sbjct 185450 AGGCCTGTGACGCATGTTGG-ACCGGCGAGCTTCAGGGATGGGGTAGTAGTTGACGTCAA 185508
Query 221598 TCAGATTGTTGAGGTT 221613
| | |||||||||||
Sbjct 185509 TGATCTTGTTGAGGTT 185524
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928837578231680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |