Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq370 197 3e-45 seq415 105 1e-17 >seq370 Length=376741 Score = 197 bits (218), Expect = 3e-45 Identities = 392/569 (69%), Gaps = 15/569 (3%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 || ||| | ||||||||||||||| || ||| |||||| ||||| ||||| || || Sbjct 251271 ATCTGGCAAATGTACAAGAAGGCTGAAGCCTCCTTCTGGACTGCCGAGGAGATGGACCTC 251330 Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTT--TCTC 25590 |||||||| | | | |||| || || || | | | |||||| || || |||| Sbjct 251331 TCCAAGGACCTTCATGACTGGAACAACCGCCTTAACGACA-ACGAGCGTCACTTCATCTC 251389 Query 25591 AAGTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGA 25649 | | || | || ||||| || ||||| |||||||| || |||||||| || ||| || Sbjct 251390 ACAT--GTCCTCGCCTTCTTCGCCGCCTCGGATGGTATCGTCAACGAGAACCTCGTG-GA 251446 Query 25650 GAGATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGC 25709 | | ||| ||| ||||| ||| || ||||| |||||||| |||||||| || Sbjct 251447 GCGCTTCTCCAATGAAGTCCAGGCCGCTGAGGCACGATGTTTCTATGGTTTCCAAATCAT 251506 Query 25710 CATCGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGT 25769 || || || | || || ||| || || |||| | || ||||| | ||| Sbjct 251507 GATGGAGAACATCCATTCAGAGACATACTCCCTGCTTATCGACACCTACATCAAGGACCC 251566 Query 25770 CGCCGAGAGAGATCGGCTGTTTGGTGCCATCGAGCAC-ATACCCAGCATCAAGAGGAAGG 25828 |||| || | || || || | ||| | || ||| || || ||||||||| ||| | Sbjct 251567 CGCCCAGCGCGAATACCTCTTCGACGCCGTTGA-CACTATCCCTTGCATCAAGAAGAAAG 251625 Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCG-CTACGTTTGGCGAGCGGCTGGTA 25887 | ||||| | | |||||| | | | || | |||| |||| ||| || || || Sbjct 251626 CCGACTGGGCTCTCACCTGGATCTCC-GATAAAGAGTCTACCTTTGCCGAACGTCTAGTT 251684 Query 25888 GCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTC 25947 ||||| ||||||||||||||||| || ||| ||| || || || ||||||||||| | Sbjct 251685 GCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTTTCGCATCCATCTTCTGGTTG 251744 Query 25948 AAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAG 26007 ||| || || ||||||||| || || || ||||||||||||||| | || || Sbjct 251745 AAGAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACGAGCTCATCAGCCGTGATGAA 251804 Query 26008 GGTCTCCACAGAGATTTTGCCTGCCTGCT 26036 || | || | |||||||||||||| || Sbjct 251805 GGCATGCATACCGATTTTGCCTGCCTACT 251833 Score = 138 bits (152), Expect = 2e-27 Identities = 298/439 (68%), Gaps = 10/439 (2%) Strand=Plus/Minus Query 25603 GCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCT-GTGCGAGAGATTCACCAG 25661 || |||||||| | || ||||| || || |||||||| || ||| || | ||| | || Sbjct 250110 GCGTTCTTTGCCTCTTCGGATGGCATTGTCAACGAGAACCTTGTG-GAACGCTTCTCGAG 250052 Query 25662 GGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATCGAAAATGT 25721 ||||||||| | ||||||| |||||||| ||||| || || ||||||||||| Sbjct 250051 TGAAGTGCAGATTGCGGAGGCCCGTTGTTTCTATGGTTTTCAAATTATGATCGAAAATGT 249992 Query 25722 GCACTCTGAGGTGTATGCCAAGCTTCTGAT---GACGTACATTACAGACGTCGCCGAGAG 25778 |||||| |||| |||| || || || || || ||||| | || | ||| | Sbjct 249991 GCACTCCGAGGCGTATTCC---CTCCTAATTGACACTTACATCAAGGATCCTGACGAACG 249935 Query 25779 AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGGTGGGC 25838 || || || | || ||||| ||| || |||||| ||||| ||||| Sbjct 249934 GGACTTTCTCTTCCGGGCGATCGAAACCATTCCTTCTATCAAGCAAAAGGCAGAATGGGC 249875 Query 25839 CATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTTTGCTGC 25898 |||| ||||| | | ||| | | ||| |||||||| || || || || || Sbjct 249874 ATTGAAATGGATTTCTACCGAGACATCCGCATTTTCGGAGCGGCTTGTTGCTTTCGCAGC 249815 Query 25899 TGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCAGAAGGG 25958 ||||| ||||| ||||| || || ||||| |||||||| ||| | | || || Sbjct 249814 AGTGGAAGGCATTTTTTTTTCAGGATCCTTTGCTGCCATCTTTTGGATGAGAAAGCGAGG 249755 Query 25959 GACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTCTCCACA 26017 ||||| || || ||||| ||||||||||| ||||| | |||||||| | || | Sbjct 249754 ATTGATGCCAGGATTG-ACTTTCTCCAACGAGCTAATCAGTCGCGACGAGGGCATGCATA 249696 Query 26018 GAGATTTTGCCTGCCTGCT 26036 |||||||| |||||||| Sbjct 249695 CCGATTTTGCTTGCCTGCT 249677 >seq415 Length=258813 Score = 105 bits (116), Expect = 1e-17 Identities = 144/196 (73%), Gaps = 4/196 (2%) Strand=Plus/Plus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 || || ||||||||||||||||| |||||| |||| ||| || || | | ||| Sbjct 185331 AGCGCGGCGTGGTAGATGGTCTCGAAGATCTGGATGTTAAGTTCTTTCGCAGCCTGGGAA 185390 Query 221480 GTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538 ||| |||||||| || | |||||| | ||||| || ||||| || || | ||| || Sbjct 185391 TCGAAAGGCATACGAAGAGCCATGAAAG-CATCGGCGAGACCCTGAACGCCAAGACCAAT 185449 Query 221539 GGGCCTGTGTCTCCTGTTGGAAGCGGC-CGCTTCTGGCACGGGATAAAAGTTGACGTCGA 221597 |||||||| | | |||||| | |||| ||||| || | ||| || |||||||||| | Sbjct 185450 AGGCCTGTGACGCATGTTGG-ACCGGCGAGCTTCAGGGATGGGGTAGTAGTTGACGTCAA 185508 Query 221598 TCAGATTGTTGAGGTT 221613 | | ||||||||||| Sbjct 185509 TGATCTTGTTGAGGTT 185524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928837578231680