Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq412 154 1e-31 seq298 114 8e-20 seq433 105 4e-17 >seq412 Length=416704 Score = 154 bits (170), Expect = 1e-31 Identities = 449/689 (65%), Gaps = 2/689 (0%) Strand=Plus/Plus Query 475487 CGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTACT 475546 ||||| |||||||||| ||||| ||||||||| | || ||||| ||||| ||||| | Sbjct 396212 CGTCTCCGAACTGCTTGCGAACGCGCTAAGCGAACCCTCTCTTCCGCTACCCAAACCTCA 396271 Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCTAAA 475606 | ||| | || ||||| || || || ||||| | | ||||| |||| | || Sbjct 396272 ATCGAAATCGACTCTCTGTTCGATGGTATTGACTTTTATACTTCCCTTACCCGTGCCCGT 396331 Query 475607 TTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCTC 475666 || || || | || ||||| || ||| || | || ||||| || |||| || Sbjct 396332 TTCGAGGAACTGTGCCAGGATCTTTTCCGAAGCACCCTCGAGCCCGTCGAGAAAGTCCTT 396391 Query 475667 AGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAACA 475726 | || ||||| | ||||| | | ||||| ||||| ||||| || || || || || Sbjct 396392 CGTGACTCTAAGATCGACAAGGCTAACGTCCACGAAATCGTTCTCGTTGGTGGCTCCACC 396451 Query 475727 AGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTAAATGAA 475786 | || || || | | |||| | || ||||| || || || | Sbjct 396452 CGTATCCCTCGTATTGTCAAGCTCGTTTCCGACTTCTTCAATGGCAAGGAGCCCAACAAG 396511 Query 475787 AGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCA 475846 || | || || ||||| || || || || || ||||| |||||||| ||||| | || Sbjct 396512 AGCATCAACCCCGATGAGGCCGTCGCCTACGGTGCTGCCGTCCAAGCTGCTATCCTCTCT 396571 Query 475847 GGTCAATCAGACGAGAA-ACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCATT 475905 ||| | | ||||| ||| || | | | | || ||||||| |||| || || | Sbjct 396572 GGTGATACCTCTGAGAAGACTCAAGACT-TGCTGCTCCTTGACGTTGCTCCTCTCTCCCT 396630 Query 475906 AGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCC 475965 ||| | || |||| ||| || | ||||| ||| || | |||| || || |||| Sbjct 396631 CGGTATCGAGACAGCTGGTGGTGTCATGACCGCTCTCATCAAGCGAAACACCACTGTCCC 396690 Query 475966 ATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCA 476025 ||| || || || | || ||||| || | || || ||| || ||| ||| || Sbjct 396691 TACCAAGAAGTCCGAAATTTTCTCCACCTACGCCGACAACCAACCAGGTGTGCTCATTCA 396750 Query 476026 AATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCT 476085 | ||| || ||||| | ||| || || || ||| || || | || | || Sbjct 396751 AGTCTACGAGGGTGAGCGTGCTCGCACCAAGGACAACAACTTGCTCGGCAAGTTCGAGCT 396810 Query 476086 TGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGA 476145 || || ||||| |||||| | || ||||||||||| ||||| || || |||||||| Sbjct 396811 GTCTGGCATCCCTCCCGCTCCCCGTGGCGTTCCTCAAATCGAAGTCACCTTCGATATTGA 396870 Query 476146 TGCAAATGGTATTCTTAATGTTACTGCTT 476174 ||| |||||||| | ||||| | |||| Sbjct 396871 TGCCAATGGTATCTTGAATGTCTCCGCTT 396899 >seq298 Length=714934 Score = 114 bits (126), Expect = 8e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 ||||||||||| || ||||| || ||| || || || ||||| |||| || || Sbjct 385395 CGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGACAGGGTG 385336 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||||| || ||||| |||||||| ||||||||||| ||||| ||||| || ||| Sbjct 385335 CGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGGATGCCT 385276 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||| ||||| ||||| || || |||||||| |||| | |||||| Sbjct 385275 TCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACCTCAAGG 385216 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || |||||||| ||||| || || || || Sbjct 385215 GTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTG 385178 >seq433 Length=1580550 Score = 105 bits (116), Expect = 4e-17 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || || |||||||| || ||| || || |||||||| | || || Sbjct 1108519 ACGGAGACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGT 1108460 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || |||||||| || |||||||| ||||||||||| |||||||| || || Sbjct 1108459 ACGACCATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCC 1108400 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 ||||||||| || ||||| || ||| || || || || | || | | || | Sbjct 1108399 TTCCTTGTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGA-CCTCGA 1108341 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || || || || ||||| ||||| ||||| ||||| Sbjct 1108340 GAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATTTG 1108301 Score = 96.9 bits (106), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| || || || |||||||| |||||| ||||| | || || |||| || || Sbjct 1108747 ACGGAGGCGAAGAACAAGATGGAGTGTAGACTCTTTCTGGATGTTGTAGTCAGAGAGGGT 1108688 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||| || || ||||||||||| || || ||||||||||| |||||||| || || Sbjct 1108687 GCGCCCATCCTCTAGCTGCTTTCCAGCGAAGATCAGACGTTGTTGGTCAGGAGGGATGCC 1108628 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAA 480729 |||||||| |||||||| |||||| ||||| || || | || | | | ||| Sbjct 1108627 CTCCTTGTCCTGAATCTTGGCCTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 1108568 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || || || ||||| ||||| || || Sbjct 1108567 -CGTGATGGTCTTGCCCGTAAGCGTCTTGACGAAGATCTG 1108529 Score = 93.3 bits (102), Expect = 3e-13 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| || ||||| || || || || || || || ||||||| || || Sbjct 1108975 ACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAATGTTGTAATCAGAGAGCGT 1108916 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 | ||||||||| || || || || || |||||||| ||||||||||| ||||| || Sbjct 1108915 ACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTGTTGATCAGGGGGAATACC 1108856 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAG 480730 |||||| ||||||||||| || ||| ||||| || || | | || || Sbjct 1108855 TTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTCGGAAGATTCGACCTCGAG 1108796 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || || ||||| ||||| ||||| || || Sbjct 1108795 AGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTG 1108757 Score = 91.5 bits (100), Expect = 1e-12 Identities = 153/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| ||||| ||||| || || || | ||| || |||| || || Sbjct 1108290 CGCAGACGGAGAACAAGGTGAAGGGTTGACTCCTTCTGGATATTGTAGTCAGACAGGGTG 1108231 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | ||| || || ||||||||||| || || |||||||| || || ||||| || || Sbjct 1108230 CGCCCATCCTCGAGCTGCTTTCCAGCGAAGATCAGACGTTGCTGGTCGGGAGGGATGCCC 1108171 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAG 480730 |||||||| || ||||| |||||| || || ||||| | | | | ||| || Sbjct 1108170 TCCTTGTCCTGGATCTTGGCTTTGACGTTATCGATGGTATCGGAAGACTCGA-CTTCGAG 1108112 Query 480731 GGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||||| || || || ||||| ||||| ||||| || || Sbjct 1108111 AGTAATGGTCTTGCCCGTGAGGGTCTTGACGAAGATCTG 1108073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268152519402056