Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq345 107 3e-18
>seq345
Length=266695
Score = 107 bits (118), Expect = 3e-18
Identities = 211/310 (68%), Gaps = 8/310 (3%)
Strand=Plus/Minus
Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920
|||||||||| || || | ||||| | |||||| ||||| ||||| ||||| ||
Sbjct 141267 CATGTCCCCAATCTCGCAACGCATCCAAATTTCCAAGATACAAACACGACTGCTTG--TT 141210
Query 47921 CAGAGATTGCTTTTAAT----GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGT 47976
||| ||| | | | || || |||||||| | || ||||| || || ||
Sbjct 141209 --GAGCTTGATATCAGCAACAGCCCTCGTAATCTTCCTCGTCACAAACGTCCGTCCGCGC 141152
Query 47977 CTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGA 48036
|||||| || || ||||| | || ||| |||| ||| |||| || || || |
Sbjct 141151 CTTGGACTCTCGTGGTTAAACAAGATCCCATTACATGCAAACATCCCATAACTCTCCCTG 141092
Query 48037 TAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAG 48096
|| ||| |||||||| | ||||| ||||| || || || || |||||||||
Sbjct 141091 TAATTCACGCAAATCCAGTAGGCGTAGAGCTTTGCGCAGCCGTAGGGCGAGCGTGGATAG 141032
Query 48097 AAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGAT 48156
|| || || ||||| ||||||| ||||| ||||| ||||| || || ||||||
Sbjct 141031 AACGGCGTCGTCTCGCTCTGTGGCGTCTCGACGACCTTGCCATAGAGCTCGGAGGTGGAG 140972
Query 48157 GCTTGATAGA 48166
||||| ||||
Sbjct 140971 GCTTGGTAGA 140962
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665489225781040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |