Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq345 107 3e-18 >seq345 Length=266695 Score = 107 bits (118), Expect = 3e-18 Identities = 211/310 (68%), Gaps = 8/310 (3%) Strand=Plus/Minus Query 47861 CATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTT 47920 |||||||||| || || | ||||| | |||||| ||||| ||||| ||||| || Sbjct 141267 CATGTCCCCAATCTCGCAACGCATCCAAATTTCCAAGATACAAACACGACTGCTTG--TT 141210 Query 47921 CAGAGATTGCTTTTAAT----GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGT 47976 ||| ||| | | | || || |||||||| | || ||||| || || || Sbjct 141209 --GAGCTTGATATCAGCAACAGCCCTCGTAATCTTCCTCGTCACAAACGTCCGTCCGCGC 141152 Query 47977 CTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGA 48036 |||||| || || ||||| | || ||| |||| ||| |||| || || || | Sbjct 141151 CTTGGACTCTCGTGGTTAAACAAGATCCCATTACATGCAAACATCCCATAACTCTCCCTG 141092 Query 48037 TAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAG 48096 || ||| |||||||| | ||||| ||||| || || || || ||||||||| Sbjct 141091 TAATTCACGCAAATCCAGTAGGCGTAGAGCTTTGCGCAGCCGTAGGGCGAGCGTGGATAG 141032 Query 48097 AAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGAT 48156 || || || ||||| ||||||| ||||| ||||| ||||| || || |||||| Sbjct 141031 AACGGCGTCGTCTCGCTCTGTGGCGTCTCGACGACCTTGCCATAGAGCTCGGAGGTGGAG 140972 Query 48157 GCTTGATAGA 48166 ||||| |||| Sbjct 140971 GCTTGGTAGA 140962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665489225781040