Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq415 96.9 4e-15
seq370 86.0 7e-12
>seq415
Length=258813
Score = 96.9 bits (106), Expect = 4e-15
Identities = 180/262 (69%), Gaps = 2/262 (1%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
||||| | ||| | ||||| ||||| |||||||||||||| |||||||| |||
Sbjct 186600 CCACAACAAATGATTATGCGTGTCGCTGTCGGCATCCACGGGCGGGACATTGAACGTGTT 186541
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 75330
| || || || | |||||| | | ||| |||| ||||| | || ||||||||
Sbjct 186540 CTCGAAACTTATCATCTGATGTCAGAGCGCTAT-TTCACGCACGCCTCGCCCACCCTCTT 186482
Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390
||| ||||||||||| || ||| || | ||||||||| || || ||||| ||
Sbjct 186481 CAACGCTGGTACACCTCATCCTCAGTTGAGCTCCTGCTTCCTTGTCTGCATGAAGGAAGA 186422
Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450
|| ||| | |||||||||| || | | | | ||||| ||| ||| |||||
Sbjct 186421 TTCCATCGAAGGTATCTATGATACCTTGAAGAACTGTGCCATGATCAGCAAGACTGCTGG 186362
Query 75451 GGGTATTGGGATGCACATCCAT 75472
|| ||||| | ||||||||
Sbjct 186361 TGGAATTGGTCTCAACATCCAT 186340
>seq370
Length=376741
Score = 86.0 bits (94), Expect = 7e-12
Identities = 104/142 (73%), Gaps = 0/142 (0%)
Strand=Plus/Plus
Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128
|||| ||||| || || |||| || || ||||||||| || ||||||||||| || |
Sbjct 251665 CCTTTGCCGAACGTCTAGTTGCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTT 251724
Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188
|| | || | |||||||||||||| ||||||||||| ||| | ||||| || |
Sbjct 251725 TCGCATCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACG 251784
Query 65189 AACTTATTTCCCGAGATGAGGG 65210
| || || ||| ||||| ||
Sbjct 251785 AGCTCATCAGCCGTGATGAAGG 251806
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596564961671360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |