Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq415 96.9 4e-15 seq370 86.0 7e-12 >seq415 Length=258813 Score = 96.9 bits (106), Expect = 4e-15 Identities = 180/262 (69%), Gaps = 2/262 (1%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 ||||| | ||| | ||||| ||||| |||||||||||||| |||||||| ||| Sbjct 186600 CCACAACAAATGATTATGCGTGTCGCTGTCGGCATCCACGGGCGGGACATTGAACGTGTT 186541 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGG-TATGTTCATTCACGCAACACCAACCCTCTT 75330 | || || || | |||||| | | ||| |||| ||||| | || |||||||| Sbjct 186540 CTCGAAACTTATCATCTGATGTCAGAGCGCTAT-TTCACGCACGCCTCGCCCACCCTCTT 186482 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| ||||||||||| || ||| || | ||||||||| || || ||||| || Sbjct 186481 CAACGCTGGTACACCTCATCCTCAGTTGAGCTCCTGCTTCCTTGTCTGCATGAAGGAAGA 186422 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || ||| | |||||||||| || | | | | ||||| ||| ||| ||||| Sbjct 186421 TTCCATCGAAGGTATCTATGATACCTTGAAGAACTGTGCCATGATCAGCAAGACTGCTGG 186362 Query 75451 GGGTATTGGGATGCACATCCAT 75472 || ||||| | |||||||| Sbjct 186361 TGGAATTGGTCTCAACATCCAT 186340 >seq370 Length=376741 Score = 86.0 bits (94), Expect = 7e-12 Identities = 104/142 (73%), Gaps = 0/142 (0%) Strand=Plus/Plus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| ||||| || || |||| || || ||||||||| || ||||||||||| || | Sbjct 251665 CCTTTGCCGAACGTCTAGTTGCCTTCGCTGCTGTGGAGGGCATTTTCTTCTCCGGCTCTT 251724 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | || | |||||||||||||| ||||||||||| ||| | ||||| || | Sbjct 251725 TCGCATCCATCTTCTGGTTGAAGAAGCGTGGTCTCATGCCCGGCTTGACATTCTCTAACG 251784 Query 65189 AACTTATTTCCCGAGATGAGGG 65210 | || || ||| ||||| || Sbjct 251785 AGCTCATCAGCCGTGATGAAGG 251806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596564961671360