Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq433 104 4e-17 >seq433 Length=1580550 Score = 104 bits (114), Expect = 4e-17 Identities = 167/240 (70%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 193121 AGTAATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAAT 193180 ||||| ||| ||||||| | | ||||| || || || | || | ||| || ||| Sbjct 1108993 AGTAACTTAATTACCACCACGGAGACGAAGAACAAGGTGGAGGGTGGACTCCTTCTGAAT 1108934 Query 193181 ATTATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTG 193240 || || || || | ||| | | ||| || | ||||| ||||| || || | | ||| Sbjct 1108933 GTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGCTG 1108874 Query 193241 TTGATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATC 193300 ||||||||| || || ||||| |||||||| || || | || | ||| ||| || || Sbjct 1108873 TTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTGTC 1108814 Query 193301 GGAAGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 |||||| || || || ||||| || || || || || || || || || || || ||||| Sbjct 1108813 GGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGCAT 1108754 Score = 102 bits (112), Expect = 1e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 193146 CGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAA 193205 ||||| || ||||| | || | || || ||| ||||| ||||| | || | | | Sbjct 1108512 CGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACCA 1108453 Query 193206 TCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTA 193265 || || | ||| || ||||||||||| | | ||||| |||||||| || ||||| || Sbjct 1108452 TCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTTG 1108393 Query 193266 TCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATA 193325 || || || |||| || | ||| || || ||||| ||||| || || ||||| || Sbjct 1108392 TCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGATG 1108333 Query 193326 GTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 || || || || || || || || || ||||||||| Sbjct 1108332 GTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899647405187040