Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq433 95.1 2e-14 seq298 86.0 1e-11 >seq433 Length=1580550 Score = 95.1 bits (104), Expect = 2e-14 Identities = 130/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 192355 ATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTC 192414 || || |||||||| | || || |||| || | ||||| || || ||||| | | | Sbjct 1108935 ATGTTGTAATCAGAGAGCGTACGACCATCTTCAAGCTGTTTGCCGGCGAAGATAAGACGC 1108876 Query 192415 TGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAA 192474 ||||||||||| || || ||||| |||||||| || ||| || ||||| || | Sbjct 1108875 TGTTGATCAGGGGGAATACCTTCCTTATCTTGAATCTTAGCCTTCACATTGTCAATTGTG 1108816 Query 192475 TCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGC 192534 || || ||||| || || ||||| ||||| || ||||| | || || | || |||||| Sbjct 1108815 TCGGAAGATTCGACCTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTGACGAAGATCTGC 1108756 Query 192535 AT 192536 || Sbjct 1108755 AT 1108754 >seq298 Length=714934 Score = 86.0 bits (94), Expect = 1e-11 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 ||||| || | |||||| | || | ||| | ||||| ||| || || ||||| ||| Sbjct 385404 ATACCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCA 385345 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || | || || | || || | || || ||||||||||| | | || ||||| || Sbjct 385344 GACAGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGA 385285 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || ||||| |||||||| || || || || ||| |||| || || ||||| Sbjct 385284 GGGATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCC 385225 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || || || || || || || | || || | ||| |||||||| Sbjct 385224 ACCTCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984472154309700