Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq370 123 3e-22 seq433 105 8e-17 >seq370 Length=376741 Score = 123 bits (136), Expect = 3e-22 Identities = 204/293 (70%), Gaps = 5/293 (2%) Strand=Plus/Minus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| ||||| || || ||||| | ||||| || | | |||||||||||| | Sbjct 251814 TATGCATGCCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCCGGGCATGAGAC 251755 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291 | |||||||| | ||| ||||||| |||| ||| ||||| || |||||||| || | Sbjct 251754 CACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAATGCCCTCCACAG 251695 Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC-CCTCCTTGTTGATCCACTTC 869350 | || ||| | | || || ||||||||||| || | | | | | |||||| | Sbjct 251694 CAGCGAAGGCAACTAGACGTTCGGCAAAGGT----AGACTCTTTATCGGAGATCCAGGTG 251639 Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410 | ||||||||||| || ||| | | | || | ||||| | |||| ||||||| Sbjct 251638 AGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGTCAACGGCGTCGAAGAGGTAT 251579 Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 || | ||| |||||||||| ||||||||||| || || || || ||||| Sbjct 251578 TCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAGCAGGGAGTATGTCTC 251526 Score = 100 bits (110), Expect = 3e-15 Identities = 201/293 (69%), Gaps = 5/293 (2%) Strand=Plus/Plus Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231 ||||| || |||||||||||||| | |||||| || | | || ||||| | | Sbjct 249696 TATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAATCCTGGCATCAATC 249755 Query 869232 CGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACG 869290 | ||||| | | |||||||||||| ||| || || || ||||| ||||| || || Sbjct 249756 CTCGCTTTCTCATCCAAAAGATGGCAGCA-AAGGATCCTGAAAAAAAAATGCCTTCCACT 249814 Query 869291 GCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTC 869350 || || || | | |||||||| | ||| || || | ||| | ||||| ||| Sbjct 249815 GCTGCGAAAGCAACAAGCCGCTCCGAAAA--TGCGGATG-TCTCGGTAGAAATCCATTTC 249871 Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410 | ||||| || ||||||| | | | || || | || ||||| || || ||||| | Sbjct 249872 AATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGGAAGAGAAAG 249931 Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||| |||| | || ||||||| || ||||| || ||||| ||||| | ||| Sbjct 249932 TCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCCTC 249984 >seq433 Length=1580550 Score = 105 bits (116), Expect = 8e-17 Identities = 104/132 (79%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111 || || ||||| || || ||||| ||| ||||| || |||||||| ||||| || ||| Sbjct 1196178 ATTGGTGGCACAGTAACTTGCGTTATTCGAAACGTCCCCGCAGGCCTTGGCGAACCTGTG 1196119 Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171 || ||||| ||||||| || | |||||||| |||||||| || ||||||||||||| Sbjct 1196118 -TTCGACAAATTCGAGGCTGCCTTGGCCCACGCTATGCTGTCTATTCCGGCCACCAAGGC 1196060 Query 19172 ATTCGAGATTGG 19183 |||||| || || Sbjct 1196059 ATTCGAAATCGG 1196048 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107088155767174