Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_021858.1
Length=1908524
Score E
Sequences producing significant alignments: (Bits) Value
seq370 123 3e-22
seq433 105 8e-17
>seq370
Length=376741
Score = 123 bits (136), Expect = 3e-22
Identities = 204/293 (70%), Gaps = 5/293 (2%)
Strand=Plus/Minus
Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231
||||| ||||| || || ||||| | ||||| || | | |||||||||||| |
Sbjct 251814 TATGCATGCCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCCGGGCATGAGAC 251755
Query 869232 CGCGCTTCTTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGG 869291
| |||||||| | ||| ||||||| |||| ||| ||||| || |||||||| || |
Sbjct 251754 CACGCTTCTTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAATGCCCTCCACAG 251695
Query 869292 CGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGC-CCTCCTTGTTGATCCACTTC 869350
| || ||| | | || || ||||||||||| || | | | | | |||||| |
Sbjct 251694 CAGCGAAGGCAACTAGACGTTCGGCAAAGGT----AGACTCTTTATCGGAGATCCAGGTG 251639
Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410
| ||||||||||| || ||| | | | || | ||||| | |||| |||||||
Sbjct 251638 AGAGCCCAGTCGGCTTTCTTCTTGATGCAAGGGATAGTGTCAACGGCGTCGAAGAGGTAT 251579
Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
|| | ||| |||||||||| ||||||||||| || || || || |||||
Sbjct 251578 TCGCGCTGGGCGGGGTCCTTGATGTAGGTGTCGATAAGCAGGGAGTATGTCTC 251526
Score = 100 bits (110), Expect = 3e-15
Identities = 201/293 (69%), Gaps = 5/293 (2%)
Strand=Plus/Plus
Query 869172 TATGCGAACCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGC 869231
||||| || |||||||||||||| | |||||| || | | || ||||| | |
Sbjct 249696 TATGCATGCCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAATCCTGGCATCAATC 249755
Query 869232 CGCGCTTCTTGAGCCAAAAGATGGC-GCAGAAACTGCCCGAGAAAAAGATGCCCTCGACG 869290
| ||||| | | |||||||||||| ||| || || || ||||| ||||| || ||
Sbjct 249756 CTCGCTTTCTCATCCAAAAGATGGCAGCA-AAGGATCCTGAAAAAAAAATGCCTTCCACT 249814
Query 869291 GCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGTTGATCCACTTC 869350
|| || || | | |||||||| | ||| || || | ||| | ||||| |||
Sbjct 249815 GCTGCGAAAGCAACAAGCCGCTCCGAAAA--TGCGGATG-TCTCGGTAGAAATCCATTTC 249871
Query 869351 ATCGCCCAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGG 869410
| ||||| || ||||||| | | | || || | || ||||| || || ||||| |
Sbjct 249872 AATGCCCATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGGAAGAGAAAG 249931
Query 869411 TCCTTTTCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463
||| |||| | || ||||||| || ||||| || ||||| ||||| | |||
Sbjct 249932 TCCCGTTCGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCCTC 249984
>seq433
Length=1580550
Score = 105 bits (116), Expect = 8e-17
Identities = 104/132 (79%), Gaps = 2/132 (2%)
Strand=Plus/Minus
Query 19053 ATCGGCGGCACGGTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCC-GTG 19111
|| || ||||| || || ||||| ||| ||||| || |||||||| ||||| || |||
Sbjct 1196178 ATTGGTGGCACAGTAACTTGCGTTATTCGAAACGTCCCCGCAGGCCTTGGCGAACCTGTG 1196119
Query 19112 CTTTGACAAGATCGAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGG 19171
|| ||||| ||||||| || | |||||||| |||||||| || |||||||||||||
Sbjct 1196118 -TTCGACAAATTCGAGGCTGCCTTGGCCCACGCTATGCTGTCTATTCCGGCCACCAAGGC 1196060
Query 19172 ATTCGAGATTGG 19183
|||||| || ||
Sbjct 1196059 ATTCGAAATCGG 1196048
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 6107088155767174
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |