Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq332 105 6e-18 >seq332 Length=249393 Score = 105 bits (116), Expect = 6e-18 Identities = 257/383 (67%), Gaps = 16/383 (4%) Strand=Plus/Minus Query 34202 CCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA- 34260 |||| |||||||| || ||||| ||| ||||||| || | | | ||| | | ||| Sbjct 245175 CCGGAGGGTTTTTGAGGATGAACGTGGTGAGCTTGTG-GCGCA-TGTCGACACCAGTGCG 245118 Query 34261 -TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTA-------GCG-GAC-AC 34310 | ||||||||| |||||| || || ||||| | || ||| || || | Sbjct 245117 TTCACCGCATGCCTTGCAGTCCCGA---ATAATCTCCTCGTTACGACCCTGCTTGAGGAT 245061 Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370 || ||| || ||||| || || | || | || | || ||||| ||||| | Sbjct 245060 GACGAGATCGGTCTCGGGATTCTTGCAAGACTTGCATAGGACGAACTTCTCAATGAAGGC 245001 Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430 ||| || || || | || | || || |||| ||||||||||||| | || ||||| Sbjct 245000 ATCCAGGAGTTCTCGCAAACGATTGGCATCATGGGCGCCGTTGACGATGTAGCGGTCGTT 244941 Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490 || | ||||| || || ||||||||||||||||||||| | || |||||||| | Sbjct 244940 CTTTTCATCGAATGAGGTCTGGGCGCCCAGCTCGCACCCGAAGAATTTGGTCGGGTACGT 244881 Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550 | || || | ||| || ||||| || | |||||| | ||| |||||||| || Sbjct 244880 CGGAGGGCGACTAAGAGCACGGGCGACGTCAGACATGTTAGGGCAGACGGTCTTGATACC 244821 Query 34551 GTTGCCCTTTCCTTCGACCTTGG 34573 ||||| || || || | ||||| Sbjct 244820 ATTGCCTTTGCCCTCAATCTTGG 244798 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412838470402646