Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq332 105 6e-18
>seq332
Length=249393
Score = 105 bits (116), Expect = 6e-18
Identities = 257/383 (67%), Gaps = 16/383 (4%)
Strand=Plus/Minus
Query 34202 CCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGTGCCGTGA- 34260
|||| |||||||| || ||||| ||| ||||||| || | | | ||| | | |||
Sbjct 245175 CCGGAGGGTTTTTGAGGATGAACGTGGTGAGCTTGTG-GCGCA-TGTCGACACCAGTGCG 245118
Query 34261 -TAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTA-------GCG-GAC-AC 34310
| ||||||||| |||||| || || ||||| | || ||| || || |
Sbjct 245117 TTCACCGCATGCCTTGCAGTCCCGA---ATAATCTCCTCGTTACGACCCTGCTTGAGGAT 245061
Query 34311 GATGAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACC 34370
|| ||| || ||||| || || | || | || | || ||||| ||||| |
Sbjct 245060 GACGAGATCGGTCTCGGGATTCTTGCAAGACTTGCATAGGACGAACTTCTCAATGAAGGC 245001
Query 34371 ATCAAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTT 34430
||| || || || | || | || || |||| ||||||||||||| | || |||||
Sbjct 245000 ATCCAGGAGTTCTCGCAAACGATTGGCATCATGGGCGCCGTTGACGATGTAGCGGTCGTT 244941
Query 34431 TTTGTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAAT 34490
|| | ||||| || || ||||||||||||||||||||| | || |||||||| |
Sbjct 244940 CTTTTCATCGAATGAGGTCTGGGCGCCCAGCTCGCACCCGAAGAATTTGGTCGGGTACGT 244881
Query 34491 GGCCGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCC 34550
| || || | ||| || ||||| || | |||||| | ||| |||||||| ||
Sbjct 244880 CGGAGGGCGACTAAGAGCACGGGCGACGTCAGACATGTTAGGGCAGACGGTCTTGATACC 244821
Query 34551 GTTGCCCTTTCCTTCGACCTTGG 34573
||||| || || || | |||||
Sbjct 244820 ATTGCCTTTGCCCTCAATCTTGG 244798
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412838470402646
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |