Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01- 26] 622 sequences; 33,316,483 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq370 152 8e-31 >seq370 Length=376741 Score = 152 bits (168), Expect = 8e-31 Identities = 231/327 (71%), Gaps = 5/327 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 ||||| || || ||||| | ||||| || | |||||||||||| || |||||| Sbjct 251806 CCTTCATCACGGCTGATGAGCTCGTTAGAGAATGTCAAGCCGGGCATGAGACCACGCTTC 251747 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 || | ||| ||||||| |||| ||| ||||| || |||||||| || || || ||| Sbjct 251746 TTCAACCAGAAGATGGATGCGAAAGAGCCGGAGAAGAAAATGCCCTCCACAGCAGCGAAG 251687 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTT-GTTGATCCACTTCATCGCCCA 794519 | || || || |||||||| || || | || | | | |||||| | | ||||| Sbjct 251686 GCAACTAGACGTTCGGCAAAGGT----AGACTCTTTATCGGAGATCCAGGTGAGAGCCCA 251631 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 || || || ||| | | | || | ||||| | |||| ||||||| || || Sbjct 251630 GTCGGCTTTCTTCTTGATGCAAGGGATAGTGTCAACGGCGTCGAAGAGGTATTCGCGCTG 251571 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | | |||||||||| |||||||||||| || || ||||| |||||||| |||||||| || Sbjct 251570 GGCGGGGTCCTTGATGTAGGTGTCGATAAGCAGGGAGTATGTCTCTGAATGGATGTTCTC 251511 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCA 794666 || ||| ||||| ||||| || || Sbjct 251510 CATCATGATTTGGAAACCATAGAAACA 251484 Score = 116 bits (128), Expect = 6e-20 Identities = 223/328 (68%), Gaps = 7/328 (2%) Strand=Plus/Plus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCTAAAGCAGAGGCCGGGCATGAGGCCGCGCTTC 794400 || |||||||||||||| | |||||| || | || ||||| | || ||||| Sbjct 249704 CCCTCGTCGCGACTGATTAGCTCGTTGGAGAAAGTCAATCCTGGCATCAATCCTCGCTTT 249763 Query 794401 TTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 794460 | | ||||||||||||| || || || ||||| ||||| || || || || || Sbjct 249764 CTCATCCAAAAGATGGCAGCAAAGGATCCTGAAAAAAAAATGCCTTCCACTGCTGCGAAA 249823 Query 794461 CCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTG--ATCCACTTCATCGCCC 794518 | || |||||||| | ||| | || ||| || | ||||| |||| |||| Sbjct 249824 GCAACAAGCCGCTCCGAAAATG-----CGGATGTCTCGGTAGAAATCCATTTCAATGCCC 249878 Query 794519 ACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCT 794578 | |||||||||| | | | || || | || ||||| || || ||||| |||| | Sbjct 249879 ATTCTGCCTTTTGCTTGATAGAAGGAATGGTTTCGATCGCCCGGAAGAGAAAGTCCCGTT 249938 Query 794579 CGACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTT 794638 || | || ||||||| ||| ||||| || ||||| || || | ||| ||||| | |||| Sbjct 249939 CGTCAGGATCCTTGATGTAAGTGTCAATTAGGAGGGAATACGCCTCGGAGTGCACATTTT 249998 Query 794639 CGATGGCGATCTGGAAGCCATAAAAGCA 794666 |||| || || || ||||| || || Sbjct 249999 CGATCATAATTTGAAAACCATAGAAACA 250026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916180235023058