Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Coprinopsis_20strossmayeri_20[genbank_20GCA_5F900156845.1_202017-01-
26] 622 sequences; 33,316,483 total letters
Query= NC_023442.1
Length=120420
Score E
Sequences producing significant alignments: (Bits) Value
seq298 113 3e-20
seq433 104 2e-17
>seq298
Length=714934
Score = 113 bits (124), Expect = 3e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619
||||| | | ||| || || | ||| || || || || || ||||||||||| || |
Sbjct 385401 CCTCCGCGAAGACGGAGGACGAGATGGAGAGTAGACTCCTTCTGAATGTTATAGTCAGAC 385342
Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679
| ||||||| || ||||| || ||||||||| | || | | ||||||||| || ||
Sbjct 385341 AGGGTGCGACCGTCTTCGAGCTGCTTGCCAGCAAAGATAAGACGTTGCTGATCGGGAGGG 385282
Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739
|| || || || ||||| | || || || | || | |||||||||| ||| ||
Sbjct 385281 ATGCCTTCCTTATCTTGGATCTTCGCCTTCACGTTATCAATAGTGTCAGAAGATTCCACC 385222
Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786
||||| || || || || || || | ||| || ||||| ||||||||
Sbjct 385221 TCAAGGGTGATCGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGCAT 385175
Score = 109 bits (120), Expect = 4e-19
Identities = 151/209 (72%), Gaps = 2/209 (1%)
Strand=Plus/Minus
Query 29579 CCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGAATCATCGA 29638
|||| || || ||| || || |||||||| ||||| | || ||||| ||| ||||
Sbjct 385838 CCAAGTGGAGAGTGCTCTCCTTCTGAATGTTGTAATCAGAAAGAGTGCGCCCATCTTCGA 385779
Query 29639 GTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTTGTCTTGTA 29698
|||| ||||||||| | || | | || || || || ||||||||||| ||||| || |
Sbjct 385778 GTTGCTTGCCAGCAAAGATAAGGCGCTGTTGGTCGGGGGGAATACCCTCCTTGTCCTG-A 385720
Query 29699 ATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTATAGTTTTG 29757
|| || | ||||||| | || | |||||||| || ||||| || || || || |||
Sbjct 385719 ATCTTCGCTTTGACATTGTCAATGGTGTCAGATGACTCGACTTCCAGGGTGATGGTCTTG 385660
Query 29758 CCAGTTAAGGTTTTAACAAATATCTGCAT 29786
|| || | ||| || || || || |||||
Sbjct 385659 CCGGTAAGGGTCTTCACGAAGATTTGCAT 385631
>seq433
Length=1580550
Score = 104 bits (114), Expect = 2e-17
Identities = 153/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630
||| || || | |||||| || ||||| || |||||||||||||| | | ||| |||
Sbjct 1108513 ACGAAGAACGAGATGAAGGGTCGATTCCTTCTGAATGTTATAATCGGAGAGGGTACGACC 1108454
Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690
||| |||||||| ||||| ||| | || | | ||| || || || || || || || ||
Sbjct 1108453 ATCCTCGAGTTGCTTGCCGGCAAAAATGAGACGTTGTTGGTCAGGAGGGATGCCTTCCTT 1108394
Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750
||| || | || || ||| | || | ||||| || || || || ||||| ||
Sbjct 1108393 GTCCTGGATCTTGGCCTTCACATTGTCGATGGTGTCGGATGACTCGACCTCGAGAGTGAT 1108334
Query 29751 AGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATT 29787
|| |||||||| | ||| || || || || ||||||
Sbjct 1108333 GGTCTTGCCAGTGAGGGTCTTGACGAAGATTTGCATT 1108297
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 385216279797702
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |